Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151197g00008 ATGGACAAGGACAAACCTCTTGTTCATGGTGGAGGTCTCCCACCTCCATCGGGACGTTATTCAGGTTACTCACCCACTGGAAATGCCTTCAATGTGAAATCCGAGCCGTCTTCGTCATCTTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCAGTCATTTTGGTCATGGAATGTCCTCAGATTCTAGTGGATTTAGTCACGATATTAGCAGAATGCCCGATAATCCGCCAAGAAATAGGGGACACAGGCGTGCTCACTCAGAGATTCTAACTCTACCTGATGATATCAGCTTCGACAGTGACCTTGGTGTTGTTGGAGGGGCTGATGGGCCGTCGTTTTCTGATGACACAGAGGAGGACTTACTCTCTATGTACCTTGATATGGATAAATTCAATACGTCATCTGCTACATCGGCATTTCAATTGGGTGAGCCGTCTAATGCTGCTGCAGCTTCAGGTCCGGCGCCCACGTCAGCTCCTGGATCAGGAGGGCGTACCTCTTCTTCGGAGAACAACGTTGTTGGTAATAATGAACGGCCTAGAGTTAGACACCAACACAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGTTAGTCTCTGGTTCAGAAGACATATCTGCGGCCGATTCTAAAAAAGCAATGTCAGCTGCCAAGCTTGCTGAACTGGCCTTAATTGATCCCAAGCGTGCAAAGAGGATTTGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAACTTGAAAGGAAGGTGCAGACATTACAAACCGAAGCAACATCTTTGTCTGCACAGTTAACTCTATTGCAGAGAGATACCAATGGACTTAATTCGGAGAACAATGAGCTGAAGTTGCGATTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAAGAAATTCAGCATTTGAAAATACTGACTGGTCAAGCTATGCCTCCTAATAATGGAGGACCTATGATGAACTTTTCTTCTTTTGGAGGGGGGCAGCAATTCTATCAGAATAATCACGCGATGCACACACTTCTAGCTGCGCAACAGTTCCAACAGCTCCAGATTCATCCTCAGAAGCAGCAGCAGCAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAGCAGATGCTGCAACAACAGCAGGAACAGATGCATCAACAGTCAGGAGAGTTAAAAATGAGGTCATCTACGCCTTCTCCTGGCCCTAAAGATAATGCATCATCGGATGTAAATCCTTCAATGGGCAAGGATTGTTGA 1302 0.4639 MDKDKPLVHGGGLPPPSGRYSGYSPTGNAFNVKSEPSSSSSYPPMVPGSSPDSSHFGHGMSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNTSSATSAFQLGEPSNAAAASGPAPTSAPGSGGRTSSSENNVVGNNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNNGGPMMNFSSFGGGQQFYQNNHAMHTLLAAQQFQQLQIHPQKQQQQQQHQFQQLQQQMLQQQQEQMHQQSGELKMRSSTPSPGPKDNASSDVNPSMGKDC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151197g00008 433 SUPERFAMILY Leucine zipper domain 233 287 IPR046347 GO:0003700|GO:0006355
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 390 433 - -
Stsc151197g00008 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 41 403 - -
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 146 199 - -
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 21 71 - -
Stsc151197g00008 433 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 390 427 - -
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 75 92 - -
Stsc151197g00008 433 Pfam bZIP transcription factor 233 291 IPR004827 GO:0003700|GO:0006355
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 161 178 - -
Stsc151197g00008 433 Coils Coil 377 397 - -
Stsc151197g00008 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Stsc151197g00008 433 MobiDBLite consensus disorder prediction 1 119 - -
Stsc151197g00008 433 Coils Coil 249 318 - -
Stsc151197g00008 433 FunFam probable transcription factor PosF21 232 285 - -
Stsc151197g00008 433 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
Stsc151197g00008 433 Gene3D - 232 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151197g00008 Stsc-Chr151197 23601 26739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151197g00008 19 363 bZIP Transcription Factor Family AT1G06070 71.920 2.43e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151197g00008 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151197g00008 - - gmx:100786738 576.63