Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00012 ATGACACGGTTGGCCAATTCTGCTGGATGGGATGTTAGAGATAAGCCAGAATTCACAGAGATTGATAAAATCATTCAGAAGGTAATAAAAAAGTTGGATCATAGATTTTCTGGGTCTGCTGATGATCTGGTAGGGATGCAACCATGTGTAGAAGAACTAGAACAAGTTCTAAAGATAAACCCGAAGGATGAAGATGTTCAAGTTCTTGGAATTTGGGGGATGGGAGGAATAGGAAAGACATCTCTTGCCAGTGTCTTTTATGACAAAATCTCTTATTTGTTTGATGCTCATTGCTTTATTGAGGATGTGAGCAGAAGTTATAGAGATGGCAGTGCTATTGCCGTCCAAAGACAGATTCTTCGTCGAACTCTAGAGGAACAAGATCTGGATAAATATAGTCCTTCTGAAATTGCTGGCATAATCAGAAATAGGCTATCTTCCAAAGAGGTCCTCATACTTCTTGATAATGTTGATGAAATAGAACAATTAGAGCAATTGGCTATTACTCCTAAATTACTTGGAAGAGGAAGCAGAATGATCATAACAACTAGGGATGAACATATTCTTAAAAGTTATGGAGTAGATGCAATTCACAAGGTTTCGTTGTTGAATTCCCATGATGCTTCGGAACTTTTTTTCAGGAAGGCTTTCAGAAGTGACTGTCCTAGTAGCAGCACTTGTATGGAGTTGACTCCAAGCATACTGGAATATGCTAATGGTCTTCCATTAGCAATCAAAGTATTGGGTTCTTTCTTGTACAATCGGAATGCTTCCCAATGGAGAGATTATTTAGAAAGATTGAAGAAATACCCGGACAGAAATGCTTCCCAATGGAGAGATTATTTAGAAAGATTGAAGAAATACCCGGACAGAAAAGTTACAGATGTGCTTCAAATAAGCTTTGAGGCATTGCAAAAAGAAGACAAAGAAATATTTTTGCACATTGCTTGCTTTTTCAGGGGGGAGAGGGAAGAGTATGTAAAGCGAATTCTAGATGTTTGTGGACTACACCCTCACATTGGAGTTCCAGTTCTCAAGGAGAGAGCACTCATAGACATTAAGAACCAAGAGATTCATATGCATGACTGTAAAAAACTGGTATCTGGAATTCTGGTTGCACACTTTTAA 1128 0.3839 MTRLANSAGWDVRDKPEFTEIDKIIQKVIKKLDHRFSGSADDLVGMQPCVEELEQVLKINPKDEDVQVLGIWGMGGIGKTSLASVFYDKISYLFDAHCFIEDVSRSYRDGSAIAVQRQILRRTLEEQDLDKYSPSEIAGIIRNRLSSKEVLILLDNVDEIEQLEQLAITPKLLGRGSRMIITTRDEHILKSYGVDAIHKVSLLNSHDASELFFRKAFRSDCPSSSTCMELTPSILEYANGLPLAIKVLGSFLYNRNASQWRDYLERLKKYPDRNASQWRDYLERLKKYPDRKVTDVLQISFEALQKEDKEIFLHIACFFRGEREEYVKRILDVCGLHPHIGVPVLKERALIDIKNQEIHMHDCKKLVSGILVAHF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00012 375 Gene3D - 202 277 IPR042197 -
Stsc151194g00012 375 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 363 IPR044974 GO:0006952
Stsc151194g00012 375 PRINTS Disease resistance protein signature 144 158 - -
Stsc151194g00012 375 PRINTS Disease resistance protein signature 68 83 - -
Stsc151194g00012 375 PRINTS Disease resistance protein signature 238 252 - -
Stsc151194g00012 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 315 IPR027417 -
Stsc151194g00012 375 Gene3D - 12 198 IPR027417 -
Stsc151194g00012 375 Pfam NB-ARC domain 53 271 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151194g00012 Stsc-Chr151194 85689 87290 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00012 44 362 WRKY Transcription Factor Family AT5G45050 32.817 9.40e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00012 - - vvo:131653600 436.032