Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00010 ATGGGCGGTATAGGAAAGTCAACTCTTGCTACTGCCTTATATGATAGAATCTCTTATCAATTTCATGCTTCTTGTTTTGTTGAGAACGTCACCAAACTTTACAAGGATGGTGGTGCTATGGCCATACAAAAACAGATTCTTCGTCAATCTTTGGTCGAAAAGAATTTAGATACCTACAGTCCTTCTGAAATATCTGGGATTATAGCAAATAGGGTACATAATCTAAAGGTCCTTATTGTCCTGGACAATGTTAATCAGCTAAAGCAATTGGAAGAGTTGGCTATAAATCCTAAATTGCTTTGTGAAGGGAGTAGAATAATAATAACCACCAGGGATGAACATATTTTAAAAGCGTATGGAGCAGATGAAGTTCATAATGTTCCACTTTTGAGTGAGAAAGATGCTGAAGAACTTCTTAGCAGAAAAGCCTTCAAAAGAGATTGTTCAAGCAACAATTATGAGGAGTTGATCCCTAAAGTGCTGAAATACGCTCAAAGACATCCTCTAACAATTAGAGTGGTGGGTTCTTTCTTGTGTTCCCGCAGCGCTACCCAATGGAGAGATGCCCTGGATAGATTAAGGAATAATCTAGAAGACGAAATTACAGAAGTGCTTCGGATAAGTTATGAGAGGCTACAATTTGAGGAGAAAGTAATATTTCTGCACATTGCTTGTTTCTTTAGAGGAGAAAGAGAGGATTATGTAAAGCGAATACTACATGCTTGTGGATTACATCCTCACATTGGAATTCCTGTTATTGCAGAGAAATCACTCATAACCATTAGAAACCAGGAAATTCATATGCATGAGATGTTGCAAGATTTGGGAAAGAAAATAGTTCGGGAGAAATCTCCTCAAGAACCTGGATCTTGGAGTAGAATATGGAGTTACAAGGATTTCCATCGTGTCTTAATACCAAAACGGGGAACAAATGAAACTAAAGGCATAGTTCTTGATGTGAAAGAGGACATCCGTAAATGCAATCAGTTGAACGTTGAAGAATTGTCCAAAATGGTGGGTCTTACGCTGCTCATTATACATCAAGAAAACTATTCAGGAAGCCTTAACACTCTTTCTAATTGTCTGGAGTACCTTTGGTGGCATGGTTACCCTTTCCCTTCTTTGCCATTAAAGTATGAACCTTTTGCCAGTCTTGTTGAATTGAATCTCCCTGGTAGTAGTATCCAACGCCTATGGGAAGGCCGCAAGAGTTTAGTCTGCCTTAGAAGAGTGGATTTGAGCAACTCGAAAGAGCTTATGGAGACGCCAAATTTTGAATGGTGCACAAATCTTAAGCGATTAGATTTGTCAGGATGCACAAACCTACAGAAAGTCCACCCATCGATTGGACTTCTTGAACGCCTTGTCTACTTAAACTTGCGTGACTGTAATAGTTTGGTTAGCCTCAACTTTGGTGATGATTGCAAGCTGCACAAAATTGGAAAATACGCCAGATTTTTCAATCTTGAATACCTTGATCTTGAGAAATGTACAAGTTTGGCCAAGCTGCATGAATCTGTCTGGGCCCTTGGGAAACTTAGATCTTTGAGTTTGAGAGGCTGTACAAGGCTTAAGGAGGGACCTGACGGTATCGGTTGGATGGCATCTCTTCAAATTCTAGATTTTCAGGGCTGCTCAAAACTTTCAGAACTACAGCTTGTTAGAAGCAAAAATAAAAGAGCCAAACTCTGCACAACTGTTGGCAAGTCCATTACTTCTTCTCTAGTTCCGGAAGCTTTGACATTTCTGAATCTTGGCTTTTCTAATATATGGAAACTCCCTGATGATATTGGGGAATTAAGGGGGTTAGAAAGACTAAATTTACAGGGAAGCAAATTCTGTAGTTTACCCGATACCATTGGGAAGCTTTCCAGCCTAGCATATTTGAACTTGGAACATTGCTTTAATCTTTCTTCGCTGCCTCGATTCCCTTTTATTAATGACTCATCAGGAGGACGATATCTTAAAACAATATCCAGATCAAGGAATCAGAGATCAGGACTGTACCTGTTTAACTGTCGTGGAATCAATAAATGGTGTTGTCTAAATTGGGCATTTGTTTGGCTAACAAGATTAATTGAGCAACCTTGTCATTTCAGGTGCGGTTTTGACATTGTTATCCCTGGGGATGTAATTCCACCCTGTGAACAAGCAGAAGAAACCTTCTCTATGAAATGCAATTTAGACCCGGAGGTTAGGGACATCCATGGCTTTCAAACTTCTCGAAAGCCAGGAGTACTACATCTCTGGATTATCTATGTCTCTCGGCCACACTGCCGTTTTGTAAAAACAGGAGCCAATATCACATTTAAAACCTGCCCAGGCATTGAGATGAAGAATTGGGGATTGCGCATGGTATTCAAGCAAGATATAGAGGCAATTAAAAGCGACTTACAATATCTGGAAACCTCAAAAATGACTGACGACTTTTACTATTCCATGTATGACCCTAAAATCCAACTTCATGATCATAGGTTAGTTATTGAGAATGTGCATGTAAGCAGCAGCAGTAGAACTGGGCCTAAAATCCAGCTTCCCTACAATTGGTATGTAACTGAGGAAGAGGAAAAGGAGAATATGGAAGCCAAAGACAAAGAAATTAATCTCGCTAATATTGGCCTTTAA 2625 0.3962 MGGIGKSTLATALYDRISYQFHASCFVENVTKLYKDGGAMAIQKQILRQSLVEKNLDTYSPSEISGIIANRVHNLKVLIVLDNVNQLKQLEELAINPKLLCEGSRIIITTRDEHILKAYGADEVHNVPLLSEKDAEELLSRKAFKRDCSSNNYEELIPKVLKYAQRHPLTIRVVGSFLCSRSATQWRDALDRLRNNLEDEITEVLRISYERLQFEEKVIFLHIACFFRGEREDYVKRILHACGLHPHIGIPVIAEKSLITIRNQEIHMHEMLQDLGKKIVREKSPQEPGSWSRIWSYKDFHRVLIPKRGTNETKGIVLDVKEDIRKCNQLNVEELSKMVGLTLLIIHQENYSGSLNTLSNCLEYLWWHGYPFPSLPLKYEPFASLVELNLPGSSIQRLWEGRKSLVCLRRVDLSNSKELMETPNFEWCTNLKRLDLSGCTNLQKVHPSIGLLERLVYLNLRDCNSLVSLNFGDDCKLHKIGKYARFFNLEYLDLEKCTSLAKLHESVWALGKLRSLSLRGCTRLKEGPDGIGWMASLQILDFQGCSKLSELQLVRSKNKRAKLCTTVGKSITSSLVPEALTFLNLGFSNIWKLPDDIGELRGLERLNLQGSKFCSLPDTIGKLSSLAYLNLEHCFNLSSLPRFPFINDSSGGRYLKTISRSRNQRSGLYLFNCRGINKWCCLNWAFVWLTRLIEQPCHFRCGFDIVIPGDVIPPCEQAEETFSMKCNLDPEVRDIHGFQTSRKPGVLHLWIIYVSRPHCRFVKTGANITFKTCPGIEMKNWGLRMVFKQDIEAIKSDLQYLETSKMTDDFYYSMYDPKIQLHDHRLVIENVHVSSSSRTGPKIQLPYNWYVTEEEEKENMEAKDKEINLANIGL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00010 874 Gene3D Ribonuclease Inhibitor 563 694 IPR032675 -
Stsc151194g00010 874 Gene3D Ribonuclease Inhibitor 470 562 IPR032675 -
Stsc151194g00010 874 Gene3D - 1 124 IPR027417 -
Stsc151194g00010 874 Gene3D - 129 213 IPR042197 -
Stsc151194g00010 874 Gene3D Ribonuclease Inhibitor 310 469 IPR032675 -
Stsc151194g00010 874 PRINTS Disease resistance protein signature 426 442 - -
Stsc151194g00010 874 PRINTS Disease resistance protein signature 71 85 - -
Stsc151194g00010 874 PRINTS Disease resistance protein signature 164 178 - -
Stsc151194g00010 874 Pfam NB-ARC domain 1 203 IPR002182 GO:0043531
Stsc151194g00010 874 Coils Coil 183 207 - -
Stsc151194g00010 874 SUPERFAMILY "Winged helix" DNA-binding domain 199 304 IPR036390 -
Stsc151194g00010 874 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 469 IPR044974 GO:0006952
Stsc151194g00010 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 223 IPR027417 -
Stsc151194g00010 874 SUPERFAMILY L domain-like 335 694 - -
Stsc151194g00010 874 Pfam Leucine Rich Repeat 385 401 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151194g00010 Stsc-Chr151194 78005 81091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00010 1 584 WRKY Transcription Factor Family AT5G45050 31.348 1.56e-78 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00010 - - adu:107462392 1049.65