Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00006 ATGGCTGCTATGGTTGACTGCCAAAGAGACTTCAATCAAGCCATCTTCCCAGTTTTCTATGATGTCGATCCTTCCGATGTTCGAAAGCAGAGTGGGTTGTACAAGGCCGCCTTTGCTTCGCTTTCACAGAAATTCACACAAGATCCAGGAAAGGTCCATCGCTGGAAGACTGCTATGACCACTTTGGCCAATTCTGTTGGTTGGGATGTTAGACATAAGCCAGAGTTCCGAGAGGTTGAAAACGTTGTTCAGAAAATAGTGAAAAAATTGAATCACAAATTCTCTGGGTTTGCTGATGACTTGATTGGGGTGCAACCTCGTGTGGAAGGTTTGGAAAAGCTTCTCAAGTTAACATCACAGGATGATGGCTTTCGAGTTTTAGGAATATGGGGGATGGGCGGTATAGGAAAGTCAACTCTTGCTACTGCCTTATATGATAGAATCTCTTATCAATTTGATGCTTCTTGTTTTGTTGAGAACGTCACCAAACTTTACAAGGATGGTGGTGCTATGTCCATACAAAAACAGATTCTTCGTCAATCTCTGGATGAAAAGAATTTAGATACCTACAGTCCTTCTGAAATATCTGGGATTATAGCAAATAGGGTTCACAATATAAGGGTCCTTATTGTGTTGGACAATGTTGATGAGCTAAAGCAATTAGAAGAGTTAGCTATCAATCCTAAATTGCTTTGTGAAGGGAGTAGAATAATAATAACCACCAGGGATAAGCATATTTTAGAAGCGTATGGAGCTAATGAAGTTCATGATGTTCCACTTTTGAGTGATGAAGAAGCTAAAGAACTTTTCAGTAGAAAAGCCTTCAAAAGAGATTGTCCAAGAAACAATTATGAGGAGCTGATCCCTGAAGTACTGAAATACGCTCAAAGACATCCTCTAACAATTAGAGTGGTGGGTTCTTTCTTGTGTTCCCGCAATGCTACCCAATGGAGAGATGCCCTGGATAGGTTAAGGAATAATCTAGAAGACGAAATTACAGAAGTGCTTCAGATTGAATAA 1020 0.402 MAAMVDCQRDFNQAIFPVFYDVDPSDVRKQSGLYKAAFASLSQKFTQDPGKVHRWKTAMTTLANSVGWDVRHKPEFREVENVVQKIVKKLNHKFSGFADDLIGVQPRVEGLEKLLKLTSQDDGFRVLGIWGMGGIGKSTLATALYDRISYQFDASCFVENVTKLYKDGGAMSIQKQILRQSLDEKNLDTYSPSEISGIIANRVHNIRVLIVLDNVDELKQLEELAINPKLLCEGSRIIITTRDKHILEAYGANEVHDVPLLSDEEAKELFSRKAFKRDCPRNNYEELIPEVLKYAQRHPLTIRVVGSFLCSRNATQWRDALDRLRNNLEDEITEVLQIE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00006 339 ProSiteProfiles TIR domain profile. 1 94 IPR000157 GO:0007165
Stsc151194g00006 339 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 68 IPR035897 -
Stsc151194g00006 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 337 IPR027417 -
Stsc151194g00006 339 Gene3D - 98 255 IPR027417 -
Stsc151194g00006 339 Gene3D - 260 339 IPR042197 -
Stsc151194g00006 339 Coils Coil 314 339 - -
Stsc151194g00006 339 Gene3D - 1 96 IPR035897 -
Stsc151194g00006 339 PRINTS Disease resistance protein signature 202 216 - -
Stsc151194g00006 339 PRINTS Disease resistance protein signature 295 309 - -
Stsc151194g00006 339 PRINTS Disease resistance protein signature 126 141 - -
Stsc151194g00006 339 Pfam TIR domain 3 93 IPR000157 GO:0007165
Stsc151194g00006 339 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 329 IPR044974 GO:0006952
Stsc151194g00006 339 Pfam NB-ARC domain 114 329 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151194g00006 Stsc-Chr151194 59308 60439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00006 102 306 WRKY Transcription Factor Family AT5G45050 34.634 5.42e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00006 - - adu:107462392 560.836