Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00005 ATGAGCGCAAAACATTCAAGTGACATGCCGTCAGATTTGGGCAGTTGGTTATGGTTAGTTATCGCTTTCATAGCAGGTATGATTTTGAGTCGGTCAATATCAGGCAGGTTAGCCACTTGGAAATCCTCACTGGAAAGCAAGTTTTGGACTCTGATGGGTCAGTTGGACCATCGAGACGGAGCTTCTCCTCCTCCCTCGGATTCCGACAACGTCCAAGATGACCAGCAAGTTATAACTTCCACCCTTCCTCTGGATTCAAACATCTGCAGCCCCCTGAGCCAAGACGACGAAGATTCATCTGGGCATTCAAACATGACCCAAGTCAGTTCGATCCGCCAGAATGATATAGCTCCGGTTCCTTCTGTGGATTCAAACAACAGCAATGAATGCGCGGATTCCCACAATACTAAGCAAGTCTATAAATACGATGTGTTCTTAAGCTTCCGTGGTCCTGACGTCCGCAACACTTTCGTTGATCATCTTTTCGAACGTCTCGAAAGAAGAGGCATTTTCACATTCAAGGATGATGAAAGGCTCGAAAGAGGAAATCAAGTTTATCCCGATCTAATGGATGCAATTAGAGATTCAAGGCTTGCTATTGTTGTCTTCTCTAGCGCATACCCCAAGTCAACGTGGTGTCTCGATGAAATGTCCGCCATAGCTGAACGCCACCGACAGAAGAAACAAATTGTTGTCCCTGTTTTCTATGACGTTACTTCTTCTCATGTTGGAAGACAAGAAGGCCCGTATGAAGCCCACTTCAATTCTGAGCGATTCATAGAAATTCTCGAAAGGGTTGCCCAATGGAAGGTTGATATGAAGTATTTGGCCAAAGTGTATGGGTTCTCTATAGTAGACTCAAACAAACCAGAGACTAAACACCTGGAAGAGATTATTGGTTTTGTGGCAAAGAAATTGAATCATAAGTTCACCTTAATTACCAGTGATCTAATTGGGATACAACCCCGAGTAGCAGAGCTCGAACAACAGCTCAAGTTGACATCAAAGGATGTTGCTTTTCAAATTCTTGAAATTTGGGGCATGAGCGGTATAGGAAAGACAGTTCTTGCTAAGATACTGTATGACAGAATCTCTTATCAATTTGATGCTTGCTGTTTTATCCAGGACGTAAACCATATTCATAAAAGTCATGCCAATGCGAGCCAGACTGCTACTACAATGATTCAAAAGCGAATTCTTCATCAAATGTTTCAGGAACAAGTAGAGTCTGACAATCCTGCCGAAATAGCTAACGTGCTACAAAACAGACTATGTAACCCAAAGCTTCCTAAAAGGGCTCTTATAGTTCTTGACGATGTTGGTGATCCAGAGCAATGGGATGATTTGGGTATAGTTCCTAGCTTACTTGGGGCAGGAAGCAGAGTTATCATAACTACTAGATTTGAGCATATTCTCAATGTGAATGCAGCTTATGAAATTCACGAGGTTCAACTATTGAATGATGATGAAGCTCTTGAACTTTTCCATAGGACAGCCTTCAATTTTGATTATCATAGCCCAGCTATCAGTGATGTATCTCGTAAGATAATAAAATATGCTCAATGTCTTCCTTCGGCATTACTAAAACTGGGTTACTACTTCAATCAAAATGCTGAAGCGCACTGGGAAAGATGCTTTCAGAAATGGAGAGAATATCCGGAAGAGAAGTATATGAACTCCCTTCTGGAAACAAATTATGAAGTTCTGAATGAAGATGAGAAGATGATCTTTCTGGATATAGCTTGTTTCTTTGCGGGAAAAAAGAAAAAGTATGTAGAGCACATTCTAGAGAGTAGAACATTAGATCCTCACCTCGCAATCCAAGAGATCCGGAAGAAATCACTCATAAAAATTAGGAACAGCGAAATTCATATGCATCAAATATTACAAGATTTGGGCAAGAAAATTGTTCGAGGCAGTAATAAAGATGAGCCAAAATTCTGGTCTAGATTGTGGGAAGCAGAGGATTTCCAAGAAGTCTTGATAGACATGGAAGGAAACAAAGTTCAGGCCATAGTATTGGATGAAGATGTCTCCAAATACCTGAAGATTGGCGGATTGTCAGAACTGAGGGATCTTAGACTGTTTATATTATACCATCATAGGAGCTCCTCAGAAAACCTCACTTTTCGTTTCAATAAGTTATGCTATGTTTCATGGCATGGTTTCTCTTACACTTCTCTGTCACTATGCATATGGTCTAATCTTGTAGAATTGGATTTACCTAATAGCAGAATCCAACAGCTATGGGAAGGCAGCCAGGCAATTCCAAAACTAAAAAGGATGAATCTGAGAAACTCAAGAAATCTTAGAACCACCCCAAATTTTGAATGTTGCCGAGGACTCGTGAGGCTGGATCTCACAGGATGCACAAACCTAACAGAGGTCCATGACTCAATTGGACTTCTCGGAAAACTTGATTACTTGAGTCTGCGAGATTGTAGCAGTCTAGCCCTTCTTGATTTCGGCGCTGGTTGCCAGTTAAGTTCTCTAAGAACTCTGCTTCTCTCTGGCTGCACCAACCTCAGCCACATGCCAGATGTGACACGGCTTTCAAATCTTAGGTACCTTGATCTTGAGCGATGTACAAGTTTGTCGACATTTCATAAGTCTATTGAGGAACACTCAAAGCTCAAGTACTTGAGTCTGAGAGGCTGCATAAATCTTGTTCCTAAACCTTACATTGTCAATGGCAACTCGTCCCTCCTAATTCTAGATTTGAGCGGTTGCATGATGATCACAAACCTTACCCACTGCAGACGAAAATTCGTACCTTCCTCCTGCTTAGAATCTTTTGTATTTCTGAATCATGACTTCCTTGAGCCAAGAAGAACTCTTGATGATTTTGTTGGAAAGTTGATGGTTTTCGATAGGGAGTGGCTTTGTTCTAAGCTAACGTATTTGAACTTGGCACATTGTCATGAACTTAGAAGATTTCCCGAGGTTTCATTTCATTGTGTTCATGATATAAAAGGTACTTTAGAACTGAATCCGCAACTCACAATCATAGGTCAAGATTATATATTCTCTTCTTCTACTGAGTGA 3045 0.4108 MSAKHSSDMPSDLGSWLWLVIAFIAGMILSRSISGRLATWKSSLESKFWTLMGQLDHRDGASPPPSDSDNVQDDQQVITSTLPLDSNICSPLSQDDEDSSGHSNMTQVSSIRQNDIAPVPSVDSNNSNECADSHNTKQVYKYDVFLSFRGPDVRNTFVDHLFERLERRGIFTFKDDERLERGNQVYPDLMDAIRDSRLAIVVFSSAYPKSTWCLDEMSAIAERHRQKKQIVVPVFYDVTSSHVGRQEGPYEAHFNSERFIEILERVAQWKVDMKYLAKVYGFSIVDSNKPETKHLEEIIGFVAKKLNHKFTLITSDLIGIQPRVAELEQQLKLTSKDVAFQILEIWGMSGIGKTVLAKILYDRISYQFDACCFIQDVNHIHKSHANASQTATTMIQKRILHQMFQEQVESDNPAEIANVLQNRLCNPKLPKRALIVLDDVGDPEQWDDLGIVPSLLGAGSRVIITTRFEHILNVNAAYEIHEVQLLNDDEALELFHRTAFNFDYHSPAISDVSRKIIKYAQCLPSALLKLGYYFNQNAEAHWERCFQKWREYPEEKYMNSLLETNYEVLNEDEKMIFLDIACFFAGKKKKYVEHILESRTLDPHLAIQEIRKKSLIKIRNSEIHMHQILQDLGKKIVRGSNKDEPKFWSRLWEAEDFQEVLIDMEGNKVQAIVLDEDVSKYLKIGGLSELRDLRLFILYHHRSSSENLTFRFNKLCYVSWHGFSYTSLSLCIWSNLVELDLPNSRIQQLWEGSQAIPKLKRMNLRNSRNLRTTPNFECCRGLVRLDLTGCTNLTEVHDSIGLLGKLDYLSLRDCSSLALLDFGAGCQLSSLRTLLLSGCTNLSHMPDVTRLSNLRYLDLERCTSLSTFHKSIEEHSKLKYLSLRGCINLVPKPYIVNGNSSLLILDLSGCMMITNLTHCRRKFVPSSCLESFVFLNHDFLEPRRTLDDFVGKLMVFDREWLCSKLTYLNLAHCHELRRFPEVSFHCVHDIKGTLELNPQLTIIGQDYIFSSSTE 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00005 1014 Gene3D Ribonuclease Inhibitor 849 1002 IPR032675 -
Stsc151194g00005 1014 Gene3D - 139 308 IPR035897 -
Stsc151194g00005 1014 Gene3D Ribonuclease Inhibitor 660 848 IPR032675 -
Stsc151194g00005 1014 Pfam TIR domain 141 311 IPR000157 GO:0007165
Stsc151194g00005 1014 Pfam Leucine Rich Repeat 735 754 IPR011713 -
Stsc151194g00005 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 580 IPR027417 -
Stsc151194g00005 1014 Gene3D - 486 575 IPR042197 -
Stsc151194g00005 1014 FunFam Disease resistance protein (TIR-NBS-LRR class) 138 308 - -
Stsc151194g00005 1014 PRINTS Disease resistance protein signature 342 357 - -
Stsc151194g00005 1014 PRINTS Disease resistance protein signature 427 441 - -
Stsc151194g00005 1014 PRINTS Disease resistance protein signature 849 865 - -
Stsc151194g00005 1014 SUPERFAMILY "Winged helix" DNA-binding domain 561 661 IPR036390 -
Stsc151194g00005 1014 ProSiteProfiles TIR domain profile. 140 306 IPR000157 GO:0007165
Stsc151194g00005 1014 MobiDBLite consensus disorder prediction 85 132 - -
Stsc151194g00005 1014 Pfam NB-ARC domain 332 555 IPR002182 GO:0043531
Stsc151194g00005 1014 Gene3D - 309 481 IPR027417 -
Stsc151194g00005 1014 SUPERFAMILY L domain-like 677 985 - -
Stsc151194g00005 1014 SMART till_3 141 279 IPR000157 GO:0007165
Stsc151194g00005 1014 SUPERFAMILY Toll/Interleukin receptor TIR domain 140 281 IPR035897 -
Stsc151194g00005 1014 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 142 819 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151194g00005 Stsc-Chr151194 55401 58869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00005 828 983 WRKY Transcription Factor Family AT4G12020 30.952 3.04e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00005 - - aip:107614139 1318.14