Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151194g00003 | ATGGGGTCAAATGATCCAAGCCAGAAGCCGCGGGTTTGGAGACCCAAGTTTAAGGCTCTACTGTGTTGCAGTTGCTTGCAGTCTCCTTCTCCCATGGATTCCATGCTGCAAGATTCAGCTTGCAGTTCCACTCATCACCCAACGGATCCCAGCAGTTTCAGGCGGGTATACAAGCATGATGTGTTTCTGAGTTTCAGAGGCACCGATACCCGCAACAATTTCACCGATCATCTCTATCATAATCTCATCAGGAAAGGAGTTTTCGCCTTCAAGGACAACGAGAGGCTTCAGAAAGGGGAAGCTATCTCCTCCCAGCTTCTGCAAGCCATCAAAGATTCCCGGATTTCTATCATCGTCTTCTCAAGGGATTACGCTTCCTCCACATGGTGCCTCGATGAGATGGCTACCATTGCTCAATGCAAGAAAGAGTTCGGACAGAAGGTTTTCTCCGTTTTCTATGATGTGGATCCTTCTGATGTTCGAAAGCAGAGTGGGGTATACAAGGATGCTTTTGCTTTGCATACAGAAAGGTTTCAACAAGATCCTGCCAAGGTTGAACGCTGGAAGAGAGCTATGACACGGTTGGCCAATTCTGCTGGATGGGATGTTAGAGATAAGCCAGAATTCACAGAGATTGATAAAATCATTCGGAAGGTAATAAAAAAATTGGATCATAGATTTTCTGGGTCTGCTGATGATCTAGTAGGGATTCAACCATGTGTAAAAGAATTAGAACAAGTTCTAAAGATAAACCCAAAGGATGAAGAAGTTCAAGTTCTTGGAATTTGGGGAATGGGTGGAATAGGAAAGACAACTATTGCAAGTGTCTTGTATGACAAAATCTCTTATATGTTTGACGCACATTGCTTTATCGAGGATGTGAGCAGAATTTACAGAGATGGCAGTGCCATTGCCGTCCAAAGACAAATTCTCCGTCGAACTCTAGAGGAACAAGATCTGGATAAATATAGTCCTTCTGAAATAGCTGGCATAATCAGAAATAGGCTATCTTCCAAAGAGGTCCTCATAGTTCTTGATAATGTTGATGAAATCGAACAATTAGAGCAATTGGCTATTAATCCTAAATTACTTGGAAGAGGAAGCAGGATGATCATAACCACTAGGGATGAACATATTCTTAAAAGCTATGGAGTAGATGCAATTCACAAGGTTTCGTTATTGACTTCTAGTGATGCTTCGGAACTTTTTGCCAGAAAGGCCTTCAAAAGTGACCGACCTAGTAGCAGCACTTGTATGGAGTTGACTCCTATCATACTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGCTCTTTCTTGTATGATAGGAATGCTTCCCAATGGAGAGATTATTTAGAAAGACTGAAGAAATATCCAGACAAAAGAGTTACAAATGTTCTTCAAATAAGTTTTGACGCTTTGGAAAAAGAAGACAAAGAAATATTTTTGCACATTGCTTGTTTTTTCAGAGGGGAGAGGGAAGAGTATGTAAAGCGAATTCTAGATGTTTGTGGACTACACCCTCACATTGGAATTCAAGTTCTCAAGGAGAGATCACTCATAACCATTAAGAACCAAGAGTTTCATATGCATGACATAGTATGGCTTTATAGCGATTTTGAAAGTGCTTTGATGTCAGCTGAGATGGGAACAAACAATGTTAAAGCCATAGTCTTGGATCAGAAAAAGGAGATGTCCGAGTGCAGACAGTTGAGGATTGGTGGATTGTCTAAATTGAGGGATCTTAAACTGCTTATATTATACCACAAAAACTTTTCAGGAAGCCTTGATTTTCTTTCTCCAAATCTACAATATCTTGCTTGGCATGGCTATCCTTTCACTTCTTTGCCTTCGTTTCAACCTTATAGTAGGCTTGTTGAACTGAACCTGCCTTATAGCAATGTCAAACGACTATGGGAAGGCAACAAGAATATCCCACACTTGGAAAAGGTGGACTTGAGCCACTCAAAGGATCTCATAGAGACGCCAAGTTTTGAATGGAACCCAAACCTTAAGCGACTAGATTTTACAGGATGCACAAATCTGACGCACGTCCACCCTTCAATTGGAATCCTTAAGCAGCTTGCATACTTGAGTTTGCAAAACTGTAGCAGTTTGTTGAGCCTCAATCTTGGAGATGACTGTAATTTAAGTTCTCTGAGAGTTCTACGCCTTTCTGGCTGCACAAACCTTAAGAAGAGCCCAGATTTCACAGGGCTTTCAAATCTTGAGTATCTAGATCTTGAAAACTGTACAAGTTTACCCACAGTTCATGAATCTGTTGGTTCTCTTGCAATGTTAAAGTTCTTGAGTTTGAGAGGCTGTATTATTATTTATATGCCCACGGAAGTCAACAATATGGTATCTCTTCAAACCCTAGATTTAAGCCGCTGTCTACGACTGAGGTATCCCCTTGGACAGATTTCTATGTCTTCCTCTTACCTAGAATCTTTGATATGTCTGGACCTTGGCACATGCCATTTTATAGAAAATATTCCTGATTCTATTGGAGAGTTGAGCTGTTTAGAAAGATTAAACTTGGAGGAAAGTCAGTGTAGTCATTTACCTGATACCATCAAGCAGCTTTCCAGACTGGCATATTTGAATTTGGCAGATTGCTTATATCTTGAAAGATTGCCTGAGCTCCCATTTGATAGTGCGCCATCAGGGGGAAGGTATTTTCAAACGGTATCCGCATCTCATAACCATAGGTCAGGATTGTATGTTATAACCTACAATAAGGTTATGAAGAAAAACTTTAATTATATGCCAGCTGCGCTCTCATGGTTTGCTAGACTTGTTGAGCAACCCTGCCATTTCAGATGTGGGTTTGACATCATAATTCCTGAAAATGAGAGTAGCGGCATTCCAGGATGGTATTTCAATCATCAGTTTAAAGTGAGCACACGGAAGAATATTTTGATCTGCCTTCTTCAGTCGAAACCAACAGGGATATTGATGCAACACATGCTTGGATAA | 2988 | 0.408 | MGSNDPSQKPRVWRPKFKALLCCSCLQSPSPMDSMLQDSACSSTHHPTDPSSFRRVYKHDVFLSFRGTDTRNNFTDHLYHNLIRKGVFAFKDNERLQKGEAISSQLLQAIKDSRISIIVFSRDYASSTWCLDEMATIAQCKKEFGQKVFSVFYDVDPSDVRKQSGVYKDAFALHTERFQQDPAKVERWKRAMTRLANSAGWDVRDKPEFTEIDKIIRKVIKKLDHRFSGSADDLVGIQPCVKELEQVLKINPKDEEVQVLGIWGMGGIGKTTIASVLYDKISYMFDAHCFIEDVSRIYRDGSAIAVQRQILRRTLEEQDLDKYSPSEIAGIIRNRLSSKEVLIVLDNVDEIEQLEQLAINPKLLGRGSRMIITTRDEHILKSYGVDAIHKVSLLTSSDASELFARKAFKSDRPSSSTCMELTPIILEYAQGLPLAIKVVGSFLYDRNASQWRDYLERLKKYPDKRVTNVLQISFDALEKEDKEIFLHIACFFRGEREEYVKRILDVCGLHPHIGIQVLKERSLITIKNQEFHMHDIVWLYSDFESALMSAEMGTNNVKAIVLDQKKEMSECRQLRIGGLSKLRDLKLLILYHKNFSGSLDFLSPNLQYLAWHGYPFTSLPSFQPYSRLVELNLPYSNVKRLWEGNKNIPHLEKVDLSHSKDLIETPSFEWNPNLKRLDFTGCTNLTHVHPSIGILKQLAYLSLQNCSSLLSLNLGDDCNLSSLRVLRLSGCTNLKKSPDFTGLSNLEYLDLENCTSLPTVHESVGSLAMLKFLSLRGCIIIYMPTEVNNMVSLQTLDLSRCLRLRYPLGQISMSSSYLESLICLDLGTCHFIENIPDSIGELSCLERLNLEESQCSHLPDTIKQLSRLAYLNLADCLYLERLPELPFDSAPSGGRYFQTVSASHNHRSGLYVITYNKVMKKNFNYMPAALSWFARLVEQPCHFRCGFDIIIPENESSGIPGWYFNHQFKVSTRKNILICLLQSKPTGILMQHMLG | 995 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151194g00003 | 995 | Gene3D | - | 28 | 196 | IPR035897 | - | |
Stsc151194g00003 | 995 | Gene3D | Ribonuclease Inhibitor | 547 | 907 | IPR032675 | - | |
Stsc151194g00003 | 995 | Gene3D | - | 204 | 389 | IPR027417 | - | |
Stsc151194g00003 | 995 | Gene3D | - | 394 | 478 | IPR042197 | - | |
Stsc151194g00003 | 995 | SMART | till_3 | 58 | 198 | IPR000157 | GO:0007165 | |
Stsc151194g00003 | 995 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 55 | 225 | - | - | |
Stsc151194g00003 | 995 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 225 | 488 | IPR027417 | - | |
Stsc151194g00003 | 995 | Pfam | Leucine Rich Repeat | 628 | 646 | IPR011713 | - | |
Stsc151194g00003 | 995 | SUPERFAMILY | "Winged helix" DNA-binding domain | 465 | 537 | IPR036390 | - | |
Stsc151194g00003 | 995 | SUPERFAMILY | L domain-like | 579 | 910 | - | - | |
Stsc151194g00003 | 995 | PRINTS | Disease resistance protein signature | 741 | 757 | - | - | |
Stsc151194g00003 | 995 | PRINTS | Disease resistance protein signature | 335 | 349 | - | - | |
Stsc151194g00003 | 995 | PRINTS | Disease resistance protein signature | 259 | 274 | - | - | |
Stsc151194g00003 | 995 | PRINTS | Disease resistance protein signature | 429 | 443 | - | - | |
Stsc151194g00003 | 995 | Pfam | TIR domain | 58 | 226 | IPR000157 | GO:0007165 | |
Stsc151194g00003 | 995 | ProSiteProfiles | TIR domain profile. | 57 | 223 | IPR000157 | GO:0007165 | |
Stsc151194g00003 | 995 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 51 | 201 | IPR035897 | - | |
Stsc151194g00003 | 995 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 59 | 734 | IPR044974 | GO:0006952 | |
Stsc151194g00003 | 995 | Pfam | NB-ARC domain | 244 | 464 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151194g00003 | Stsc-Chr151194 | 38869 | 44497 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151194g00003 | 719 | 884 | WRKY Transcription Factor Family | AT4G12020 | 35.119 | 2.92e-15 | 79.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151194g00003 | - | - | vvo:131643801 | 1020.38 |