Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00003 ATGGGGTCAAATGATCCAAGCCAGAAGCCGCGGGTTTGGAGACCCAAGTTTAAGGCTCTACTGTGTTGCAGTTGCTTGCAGTCTCCTTCTCCCATGGATTCCATGCTGCAAGATTCAGCTTGCAGTTCCACTCATCACCCAACGGATCCCAGCAGTTTCAGGCGGGTATACAAGCATGATGTGTTTCTGAGTTTCAGAGGCACCGATACCCGCAACAATTTCACCGATCATCTCTATCATAATCTCATCAGGAAAGGAGTTTTCGCCTTCAAGGACAACGAGAGGCTTCAGAAAGGGGAAGCTATCTCCTCCCAGCTTCTGCAAGCCATCAAAGATTCCCGGATTTCTATCATCGTCTTCTCAAGGGATTACGCTTCCTCCACATGGTGCCTCGATGAGATGGCTACCATTGCTCAATGCAAGAAAGAGTTCGGACAGAAGGTTTTCTCCGTTTTCTATGATGTGGATCCTTCTGATGTTCGAAAGCAGAGTGGGGTATACAAGGATGCTTTTGCTTTGCATACAGAAAGGTTTCAACAAGATCCTGCCAAGGTTGAACGCTGGAAGAGAGCTATGACACGGTTGGCCAATTCTGCTGGATGGGATGTTAGAGATAAGCCAGAATTCACAGAGATTGATAAAATCATTCGGAAGGTAATAAAAAAATTGGATCATAGATTTTCTGGGTCTGCTGATGATCTAGTAGGGATTCAACCATGTGTAAAAGAATTAGAACAAGTTCTAAAGATAAACCCAAAGGATGAAGAAGTTCAAGTTCTTGGAATTTGGGGAATGGGTGGAATAGGAAAGACAACTATTGCAAGTGTCTTGTATGACAAAATCTCTTATATGTTTGACGCACATTGCTTTATCGAGGATGTGAGCAGAATTTACAGAGATGGCAGTGCCATTGCCGTCCAAAGACAAATTCTCCGTCGAACTCTAGAGGAACAAGATCTGGATAAATATAGTCCTTCTGAAATAGCTGGCATAATCAGAAATAGGCTATCTTCCAAAGAGGTCCTCATAGTTCTTGATAATGTTGATGAAATCGAACAATTAGAGCAATTGGCTATTAATCCTAAATTACTTGGAAGAGGAAGCAGGATGATCATAACCACTAGGGATGAACATATTCTTAAAAGCTATGGAGTAGATGCAATTCACAAGGTTTCGTTATTGACTTCTAGTGATGCTTCGGAACTTTTTGCCAGAAAGGCCTTCAAAAGTGACCGACCTAGTAGCAGCACTTGTATGGAGTTGACTCCTATCATACTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGCTCTTTCTTGTATGATAGGAATGCTTCCCAATGGAGAGATTATTTAGAAAGACTGAAGAAATATCCAGACAAAAGAGTTACAAATGTTCTTCAAATAAGTTTTGACGCTTTGGAAAAAGAAGACAAAGAAATATTTTTGCACATTGCTTGTTTTTTCAGAGGGGAGAGGGAAGAGTATGTAAAGCGAATTCTAGATGTTTGTGGACTACACCCTCACATTGGAATTCAAGTTCTCAAGGAGAGATCACTCATAACCATTAAGAACCAAGAGTTTCATATGCATGACATAGTATGGCTTTATAGCGATTTTGAAAGTGCTTTGATGTCAGCTGAGATGGGAACAAACAATGTTAAAGCCATAGTCTTGGATCAGAAAAAGGAGATGTCCGAGTGCAGACAGTTGAGGATTGGTGGATTGTCTAAATTGAGGGATCTTAAACTGCTTATATTATACCACAAAAACTTTTCAGGAAGCCTTGATTTTCTTTCTCCAAATCTACAATATCTTGCTTGGCATGGCTATCCTTTCACTTCTTTGCCTTCGTTTCAACCTTATAGTAGGCTTGTTGAACTGAACCTGCCTTATAGCAATGTCAAACGACTATGGGAAGGCAACAAGAATATCCCACACTTGGAAAAGGTGGACTTGAGCCACTCAAAGGATCTCATAGAGACGCCAAGTTTTGAATGGAACCCAAACCTTAAGCGACTAGATTTTACAGGATGCACAAATCTGACGCACGTCCACCCTTCAATTGGAATCCTTAAGCAGCTTGCATACTTGAGTTTGCAAAACTGTAGCAGTTTGTTGAGCCTCAATCTTGGAGATGACTGTAATTTAAGTTCTCTGAGAGTTCTACGCCTTTCTGGCTGCACAAACCTTAAGAAGAGCCCAGATTTCACAGGGCTTTCAAATCTTGAGTATCTAGATCTTGAAAACTGTACAAGTTTACCCACAGTTCATGAATCTGTTGGTTCTCTTGCAATGTTAAAGTTCTTGAGTTTGAGAGGCTGTATTATTATTTATATGCCCACGGAAGTCAACAATATGGTATCTCTTCAAACCCTAGATTTAAGCCGCTGTCTACGACTGAGGTATCCCCTTGGACAGATTTCTATGTCTTCCTCTTACCTAGAATCTTTGATATGTCTGGACCTTGGCACATGCCATTTTATAGAAAATATTCCTGATTCTATTGGAGAGTTGAGCTGTTTAGAAAGATTAAACTTGGAGGAAAGTCAGTGTAGTCATTTACCTGATACCATCAAGCAGCTTTCCAGACTGGCATATTTGAATTTGGCAGATTGCTTATATCTTGAAAGATTGCCTGAGCTCCCATTTGATAGTGCGCCATCAGGGGGAAGGTATTTTCAAACGGTATCCGCATCTCATAACCATAGGTCAGGATTGTATGTTATAACCTACAATAAGGTTATGAAGAAAAACTTTAATTATATGCCAGCTGCGCTCTCATGGTTTGCTAGACTTGTTGAGCAACCCTGCCATTTCAGATGTGGGTTTGACATCATAATTCCTGAAAATGAGAGTAGCGGCATTCCAGGATGGTATTTCAATCATCAGTTTAAAGTGAGCACACGGAAGAATATTTTGATCTGCCTTCTTCAGTCGAAACCAACAGGGATATTGATGCAACACATGCTTGGATAA 2988 0.408 MGSNDPSQKPRVWRPKFKALLCCSCLQSPSPMDSMLQDSACSSTHHPTDPSSFRRVYKHDVFLSFRGTDTRNNFTDHLYHNLIRKGVFAFKDNERLQKGEAISSQLLQAIKDSRISIIVFSRDYASSTWCLDEMATIAQCKKEFGQKVFSVFYDVDPSDVRKQSGVYKDAFALHTERFQQDPAKVERWKRAMTRLANSAGWDVRDKPEFTEIDKIIRKVIKKLDHRFSGSADDLVGIQPCVKELEQVLKINPKDEEVQVLGIWGMGGIGKTTIASVLYDKISYMFDAHCFIEDVSRIYRDGSAIAVQRQILRRTLEEQDLDKYSPSEIAGIIRNRLSSKEVLIVLDNVDEIEQLEQLAINPKLLGRGSRMIITTRDEHILKSYGVDAIHKVSLLTSSDASELFARKAFKSDRPSSSTCMELTPIILEYAQGLPLAIKVVGSFLYDRNASQWRDYLERLKKYPDKRVTNVLQISFDALEKEDKEIFLHIACFFRGEREEYVKRILDVCGLHPHIGIQVLKERSLITIKNQEFHMHDIVWLYSDFESALMSAEMGTNNVKAIVLDQKKEMSECRQLRIGGLSKLRDLKLLILYHKNFSGSLDFLSPNLQYLAWHGYPFTSLPSFQPYSRLVELNLPYSNVKRLWEGNKNIPHLEKVDLSHSKDLIETPSFEWNPNLKRLDFTGCTNLTHVHPSIGILKQLAYLSLQNCSSLLSLNLGDDCNLSSLRVLRLSGCTNLKKSPDFTGLSNLEYLDLENCTSLPTVHESVGSLAMLKFLSLRGCIIIYMPTEVNNMVSLQTLDLSRCLRLRYPLGQISMSSSYLESLICLDLGTCHFIENIPDSIGELSCLERLNLEESQCSHLPDTIKQLSRLAYLNLADCLYLERLPELPFDSAPSGGRYFQTVSASHNHRSGLYVITYNKVMKKNFNYMPAALSWFARLVEQPCHFRCGFDIIIPENESSGIPGWYFNHQFKVSTRKNILICLLQSKPTGILMQHMLG 995
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00003 995 Gene3D - 28 196 IPR035897 -
Stsc151194g00003 995 Gene3D Ribonuclease Inhibitor 547 907 IPR032675 -
Stsc151194g00003 995 Gene3D - 204 389 IPR027417 -
Stsc151194g00003 995 Gene3D - 394 478 IPR042197 -
Stsc151194g00003 995 SMART till_3 58 198 IPR000157 GO:0007165
Stsc151194g00003 995 FunFam Disease resistance protein (TIR-NBS-LRR class) 55 225 - -
Stsc151194g00003 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 488 IPR027417 -
Stsc151194g00003 995 Pfam Leucine Rich Repeat 628 646 IPR011713 -
Stsc151194g00003 995 SUPERFAMILY "Winged helix" DNA-binding domain 465 537 IPR036390 -
Stsc151194g00003 995 SUPERFAMILY L domain-like 579 910 - -
Stsc151194g00003 995 PRINTS Disease resistance protein signature 741 757 - -
Stsc151194g00003 995 PRINTS Disease resistance protein signature 335 349 - -
Stsc151194g00003 995 PRINTS Disease resistance protein signature 259 274 - -
Stsc151194g00003 995 PRINTS Disease resistance protein signature 429 443 - -
Stsc151194g00003 995 Pfam TIR domain 58 226 IPR000157 GO:0007165
Stsc151194g00003 995 ProSiteProfiles TIR domain profile. 57 223 IPR000157 GO:0007165
Stsc151194g00003 995 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 201 IPR035897 -
Stsc151194g00003 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 734 IPR044974 GO:0006952
Stsc151194g00003 995 Pfam NB-ARC domain 244 464 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc151194g00003 Stsc-Chr151194 38869 44497 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00003 719 884 WRKY Transcription Factor Family AT4G12020 35.119 2.92e-15 79.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00003 - - vvo:131643801 1020.38