Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151194g00001 ATGGCATCAGGTTGGGCCATTTTGTCATTGTTTGTTGCCGGTACCATATTTGGCATTATTCTGACTACTCTGTTAGCATCAAGCTTGTTACCCAGAATACCCACTTGGCAATTCTTACTTCAGAGCTTGTCCCTGAGCGACGATGAAGATTCGTCGTCCTATCATTCTGTGGATTCGGACCTGAGCGACGACTATGATTCTGTGGATTCGTACCTGAGCGACGACGAAGATTCATCTTCCTATCATTCTGCGCATTCAAATATCAGCGAAGTCAAGCAGGTATACAGATACGATGTGTTCATAAGTTTCCGTGGTCCTGACGTGCGCAACAGGTTCGTTGCTCATCTTTTCGAACGTCTCACTAGAAAAGGCATTTTCACATTCATTGATGATATAAGGATCAAGAAAGGAAAACGCGTTAAGGCCGAGCTAATGGATGCAATTAGAGATTCACGGCTTGCTATCGTTGTCTTCTCTGGCACATACCCGGCCTCAAAGTGGTGTCTCGATGAAATGTCCGCTATAGCTGATCTCCACCGACAAGGGAAACAAATTGTTTACCCAGTTTTCTATGACATTACTGCTTCTAATGTTGGAGCCCAAAAGGGACAGTACCATGTCCACTTCAATTCAAAGCGAATGAGTAAAAATCCGAAGAAAACGGTTGATAAATGGAAGGCTGATATGGAGTATTTGGCCAAAGTGGAAGGCTTCCCTATGGTAGACCACTCAAACAAACAAGAGACTAAACACCTGGAAGAGATTATTGGTTTTGTGGCAAAGGAATTGAAACATAAAACCAACTTAATTACCAGTGATCTAATTGGGATACTACCCAGAGTAGCAGAGCTCGAACAACGCCTCAAGTTAACATCAAACAATGCTGCTGTTCAAATTCTTGAAATTTGGGGCATGAGTGGTATAGGAAAGACAGTTCTTGCTAACATCTTGTACAACAGAATCTTTTATCAATTTGATGCTTGCTGTTTTATTCAGGACGTAAACCATACTTCTAAAACGGATATTCAAAAAGAAATTTGTCAGCAACTTTTCCAGGAAGATCAACAATTTCTGAGTTCTCCCGACATAGCCCAGAAGCTACAACATAGGCTATGTGACACAGATCTACGTACGAAGGTTCTTATAGTTCTTGACGATGTTGGTCATCCAACGCAGTGGAATGATTTGGGTATAGTTCCTAACAAACTTGGGCCAGGAAGCAGAGTTGTCATAACTACTAGATTTAAGGATGTTCTTTATGTGGGTAATGTGCGTAAATCGTATGAGACTTACGAGGTTCCACTATTGAATGACGGAGAAGCTCTTGAACTTGTTCGAACAGAAGCCTCCAAGATTGGTTGTCCTATCCCTGTCCATGATGTAGTTCGTAAGGTAATAGAATCTGCGCAAAGTCTTCCTAAAGCAATTGTGGAACTGTGTTCCAGTTTCAGTAAAAATGCTAAAGTGAGCTGGGAAGATCACTTGAAGAGCTGGAGAACATATCCAGATGAAAGGTATATGAACAAGCTGCGGGAAGCAAATTATGCAGATCTGAATCCAGCTGAGAAGATAATATTTCTAGATATAGCTTGTTTCTTTGGGGGGAAAAGGAAGAAGTATGTGGAGCACATTCTACGGAAGAGAATAACATCAGATCCTCACCCTTTCATTCAAGCACTCCGGAGGAAATCACTCATAAAAATTAGGAATGGCAGAATTCATATGCATCAAATATTACGAGATTTGGGCAAGAAAATTGTTCGGGGCTATAAAACAGAAAATCCAGAATGCTGGGAGAGATTGTGGGATGTCGAGGATTTCAAAAATGCCTTGAATAATTCATATAGGGAAGTAAACGAAGTTCAGGCCATAGTTTTGGATAAAGATGTCTCCAGATACGAGATTGTTGAATTGTCACAAATGAGGAATCTTACACTGTTAATCTTACGTCATGAGAGGATCTCAAGAAGCCTCACTTTTAGATTGCAAGGGTTATGCTATCTTGTATGGCATGGTTACTCTTACCCTTCTTTGTCACTATCCCAATGGTCTAATCTTGTTGAATTGAATTTACCTAACAGCAGCATCCGAGAACTATGGAAAAACAGCGAGTTTCCACCAACAATTCCAAGTCTAAAAAGGGTGGATTTGAGCAACTCGAAAGATCTTGAGATCACTCCAAATTTTCAACATTGCAAAGAACTTGTGAGATTAGATTTTACAGGATGCACAAAGCTAAACAGCTTCCACGAATCGTTTGGACTTCTTACAGAACTTGATTACTTAAGTTTGCAAGGCTGTATCAAGCTAGATGATCTTAATTTTGGCTCTAATTGTCAATTAAGTTCTCTAAGAACTCTGCTCCTCTCTGGCTGCATCAACCTCAAGCGCACGTCAAGTTTGGAATGTTGTCAAGAACTTACAAGACTAGATCTTATAGGATGCACAAACCTAACGGAGGTCTATGAATCAATTAAGCGTCTTACAAAGCTTGATCACTTGAGTTTGCCGGACCATATGAATCTAGCTCTTTTTAATCTTGGCACTAATTGCCTGTTAAGTTCTCTAAGAACTCTGCATCTCTCTGGCTGCCCCAGTTTCATGCCAACGCCAAGTTTTGAATGTTTCCAAGGACTCGCGAGACTAGATCTTACAAGATGCACAAACCTAACGAGCATCGATAAATCAATTGGGCTTCTTACAAAACTTTGTCGCTTGAGTTTGCAAGACTGTACCAATCTAGCTCTTCTTGATTTTGGTACTGATTTTCAGCTAAGTTCTCTAAGAACTCTGATTATCTCTGGCTGCACCAGCCTCATAAGCACGCCAAGTTTTGAATGTTGTCAAGAACTTGTGAAACTAGATCTTACAGGATGCACAAAGCTAACAAATGTCGACAAATCAATTGGGCTTCTTGCAAAACTTCATCACTTGAGTTTGCAAGACTGTACCAATCTAGCTCTTCTTGATTTTGGCACTAATTGTCAGTTAAGTTCTCTAAGAACCCTGCTTCTCTCTGGTTGCACTAGCCTCAGTAGCACGCCAAGTTTTGAGTCTTGTCGAGAACTTGTGAGACTAGATCTAACAGGATGTACAAAGCTAACAGAGATCGACAAATCAATTGGGCTTCTTACAAAACTTGATCACTTGAGTTTGCAAGACTGTACCAGTATAACCCTTCTTGATTTTGAAACTAATTGTCAATTAAGTTCTCTAAGGACCCTGCTTCTCTCTGGCTGCACTAGCCTCAATAGCACGCCAAGTTTTGCATCTTGCCGGGAACTTGTGAGACTAGATCTTACAGGATGCACAAAGCTAACACAGGTCCACAAATCAATTGGGCTTCTTGCAAAACTTGATCACTTGAGTTTTCAAAACTGTACTAATCTAGCTCTTCTTGATTTTGGCAATGATTGTCGGTTAAGTTCTCTAAGAAACTTGCTTCTCTCTGGCTGCACTAGCCTCATTAAGACGCCATGTTTTGAATATTGTCGAGAACTTGTGAGACTAGATCTTACAGGATGCACGAAGCTAACAATGGTCCACAAATCAATTGGGCTTCTTGCAAAACTTGATCACTTGAGTTTCCAAAACTGTAGCAATCTAGCTGTTCTTGATTTTGGCCCTGTGTGTCAGTTAAGTTCTCTAAGAACATTGCTTCTCTCTGGTTGCAGTAGCCTCAGTAAGACACCAAGGTTTGGATATTGTCGAGAACTTGAGAGACTAGATCTTACAGGATGCACAAAGCTAACAGAGGTCCACAAATCAATTGGGCTTCTTGTGAAACTTGTTGGCTTGAGTTTGGAAGATTGTACCAATCTAGCTCATCTTGATTTTGGTACTAATTTTCAATTGAGTTCTCTTAGATCACTAATTCTCTCTGGCTGCACCAACCTCAAGAAAACTCCAAGTTTTGAATGTTGCCGAAAGCTTGTGAGACTAGATCTAGCAAGATGCACAAACCTAACTGAAGTCCAAATATCAATTGGGTTTCTTAAAAAACTTGATTACTTGAGTTTGCAAAACTGCACCAGTCTAGTTCGTCTTGATTTTGGCACTAAGTATCGGTTAAGTTCTCTAAGAACTCTGATTCTCTCTGGCTGCACCAACCTCAAGCATACACCAGATTTGGAGGCGCTTCCAAATCTGACGTACCTTCGCCGTGTAGAAAACTCAACACCTCTCTCTCCATCTGTGCCAAAGGAGGATCAATATGAAGAACAAAGACTGAGACTTTTCATCTCAGGTGAAGGAAAAAGCTGTTTGGGAGCAAAAGTCATGGCCAAGATGGAGTGGTTCAGAGAGATGGAAATGTCCCAAAAATCAAAGAACTGGTACAGTTTTTGGAACCAATGGTTGCAGTTACTGGATCAGGTTCTTGCTGAAGTAGTGGGAAAGGAAATACCCAGAGGATTCAATACCAAGACAGGGAAGGATTGTAAGAGATCGGTAATCCAACTTGAAGATAAAAAAAAATTAGCGAAGCTGAGCATGCAGAGTAGCTTTTATGTCTCAAAACTCCACATAAATCCAAATGTCAAAGAGGTTGTGGAGTTTAGGAATAGGGAATGGACAGCATTGGCACTAATCAGCATGACGGGATTTGTGTTCACCTTGGTGTTGATAATTTCTTACAACTGA 4641 0.4075 MASGWAILSLFVAGTIFGIILTTLLASSLLPRIPTWQFLLQSLSLSDDEDSSSYHSVDSDLSDDYDSVDSYLSDDEDSSSYHSAHSNISEVKQVYRYDVFISFRGPDVRNRFVAHLFERLTRKGIFTFIDDIRIKKGKRVKAELMDAIRDSRLAIVVFSGTYPASKWCLDEMSAIADLHRQGKQIVYPVFYDITASNVGAQKGQYHVHFNSKRMSKNPKKTVDKWKADMEYLAKVEGFPMVDHSNKQETKHLEEIIGFVAKELKHKTNLITSDLIGILPRVAELEQRLKLTSNNAAVQILEIWGMSGIGKTVLANILYNRIFYQFDACCFIQDVNHTSKTDIQKEICQQLFQEDQQFLSSPDIAQKLQHRLCDTDLRTKVLIVLDDVGHPTQWNDLGIVPNKLGPGSRVVITTRFKDVLYVGNVRKSYETYEVPLLNDGEALELVRTEASKIGCPIPVHDVVRKVIESAQSLPKAIVELCSSFSKNAKVSWEDHLKSWRTYPDERYMNKLREANYADLNPAEKIIFLDIACFFGGKRKKYVEHILRKRITSDPHPFIQALRRKSLIKIRNGRIHMHQILRDLGKKIVRGYKTENPECWERLWDVEDFKNALNNSYREVNEVQAIVLDKDVSRYEIVELSQMRNLTLLILRHERISRSLTFRLQGLCYLVWHGYSYPSLSLSQWSNLVELNLPNSSIRELWKNSEFPPTIPSLKRVDLSNSKDLEITPNFQHCKELVRLDFTGCTKLNSFHESFGLLTELDYLSLQGCIKLDDLNFGSNCQLSSLRTLLLSGCINLKRTSSLECCQELTRLDLIGCTNLTEVYESIKRLTKLDHLSLPDHMNLALFNLGTNCLLSSLRTLHLSGCPSFMPTPSFECFQGLARLDLTRCTNLTSIDKSIGLLTKLCRLSLQDCTNLALLDFGTDFQLSSLRTLIISGCTSLISTPSFECCQELVKLDLTGCTKLTNVDKSIGLLAKLHHLSLQDCTNLALLDFGTNCQLSSLRTLLLSGCTSLSSTPSFESCRELVRLDLTGCTKLTEIDKSIGLLTKLDHLSLQDCTSITLLDFETNCQLSSLRTLLLSGCTSLNSTPSFASCRELVRLDLTGCTKLTQVHKSIGLLAKLDHLSFQNCTNLALLDFGNDCRLSSLRNLLLSGCTSLIKTPCFEYCRELVRLDLTGCTKLTMVHKSIGLLAKLDHLSFQNCSNLAVLDFGPVCQLSSLRTLLLSGCSSLSKTPRFGYCRELERLDLTGCTKLTEVHKSIGLLVKLVGLSLEDCTNLAHLDFGTNFQLSSLRSLILSGCTNLKKTPSFECCRKLVRLDLARCTNLTEVQISIGFLKKLDYLSLQNCTSLVRLDFGTKYRLSSLRTLILSGCTNLKHTPDLEALPNLTYLRRVENSTPLSPSVPKEDQYEEQRLRLFISGEGKSCLGAKVMAKMEWFREMEMSQKSKNWYSFWNQWLQLLDQVLAEVVGKEIPRGFNTKTGKDCKRSVIQLEDKKKLAKLSMQSSFYVSKLHINPNVKEVVEFRNREWTALALISMTGFVFTLVLIISYN 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151194g00001 1546 Gene3D - 91 267 IPR035897 -
Stsc151194g00001 1546 Gene3D Ribonuclease Inhibitor 1068 1233 IPR032675 -
Stsc151194g00001 1546 Gene3D Ribonuclease Inhibitor 627 797 IPR032675 -
Stsc151194g00001 1546 Gene3D Ribonuclease Inhibitor 1234 1403 IPR032675 -
Stsc151194g00001 1546 SMART LRR_CC_2 732 761 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1164 1191 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1020 1047 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1236 1263 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 804 831 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 948 975 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1092 1119 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 876 903 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1357 1386 IPR006553 -
Stsc151194g00001 1546 SMART LRR_CC_2 1308 1337 IPR006553 -
Stsc151194g00001 1546 SUPERFAMILY L domain-like 1125 1391 - -
Stsc151194g00001 1546 MobiDBLite consensus disorder prediction 47 84 - -
Stsc151194g00001 1546 Pfam TIR domain 97 268 IPR000157 GO:0007165
Stsc151194g00001 1546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 529 IPR027417 -
Stsc151194g00001 1546 SMART till_3 96 235 IPR000157 GO:0007165
Stsc151194g00001 1546 SUPERFAMILY Toll/Interleukin receptor TIR domain 95 236 IPR035897 -
Stsc151194g00001 1546 Pfam NB-ARC domain 290 495 IPR002182 GO:0043531
Stsc151194g00001 1546 ProSiteProfiles TIR domain profile. 95 263 IPR000157 GO:0007165
Stsc151194g00001 1546 FunFam Disease resistance protein (TIR-NBS-LRR class) 93 265 - -
Stsc151194g00001 1546 Pfam BspA type Leucine rich repeat region (6 copies) 1268 1372 IPR026906 -
Stsc151194g00001 1546 Pfam BspA type Leucine rich repeat region (6 copies) 972 1083 IPR026906 -
Stsc151194g00001 1546 Pfam BspA type Leucine rich repeat region (6 copies) 1103 1227 IPR026906 -
Stsc151194g00001 1546 PRINTS Disease resistance protein signature 1355 1371 - -
Stsc151194g00001 1546 PRINTS Disease resistance protein signature 299 314 - -
Stsc151194g00001 1546 PRINTS Disease resistance protein signature 374 388 - -
Stsc151194g00001 1546 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 97 835 IPR044974 GO:0006952
Stsc151194g00001 1546 Gene3D Ribonuclease Inhibitor 798 921 IPR032675 -
Stsc151194g00001 1546 SUPERFAMILY L domain-like 636 963 - -
Stsc151194g00001 1546 Gene3D Ribonuclease Inhibitor 922 1067 IPR032675 -
Stsc151194g00001 1546 Gene3D - 268 425 IPR027417 -
Stsc151194g00001 1546 SUPERFAMILY "Winged helix" DNA-binding domain 514 610 IPR036390 -
Stsc151194g00001 1546 SUPERFAMILY L domain-like 851 1200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151194g00001 Stsc-Chr151194 28117 38195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151194g00001 97 910 WRKY Transcription Factor Family AT4G12020 27.995 3.27e-51 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151194g00001 - - aip:107614139 864.759