Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151186g00006 ATGCGTTGTATTGGTAATGGTAGCGCTTCCAATGGAGAGAGCAGCGTAGTTCGGTTCCCGCTGTCACCATCCAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGCTTCCTCCGATGCAATTGTAAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGCGCTATACATATGGCAGCTGGTCCTGAACTTGTTCAAGCATGTTACAGTGTTCCAGAGGTGAGGCCTGGGGTTCGGTGCCCAACTGGGGAGGCAAGGATCACTCCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACCCTGCTGCATCTCTTGCAAGTGCTTATAGGAATAGTTTGAGGGTTGCAAAGGAGAAAAACATTCAGTATATTGCATTCCCAGCTATATCATGTGGTGTCTTTGGGTAA 465 0.4645 MRCIGNGSASNGESSVVRFPLSPSSSLVIQKGDITKWSIDASSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGVRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLASAYRNSLRVAKEKNIQYIAFPAISCGVFG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151186g00006 154 Pfam Macro domain 47 154 IPR002589 -
Stsc151186g00006 154 ProSiteProfiles Macro domain profile. 14 154 IPR002589 -
Stsc151186g00006 154 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 26 154 - -
Stsc151186g00006 154 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 154 IPR043472 -
Stsc151186g00006 154 SUPERFAMILY Macro domain-like 16 154 IPR043472 -
Stsc151186g00006 154 SMART YBR022w_8 26 154 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151186g00006 Stsc-Chr151186 47307 49125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151186g00006 32 137 C2H2 Transcription Factor Family AT5G01310 33.613 1.19e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151186g00006 K23518 - qsa:O6P43_020114 256.914