Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151186g00005 ATGCGTTGTATTGGTAATGGTAGCGCTTCCAATGGAGAGAGCAGCGTAGTTCGGTTCCCGCTGTCACCATCCAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGCTTCCTCCGATGCAATTGTAAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGCGCTATACATATGGCAGCTGGTCCTGAACTTGTTCAAGCATGTTACAGTGTTCCAGAGGTGAGGCCTGGGGTTCGGTGCCCAACTGGGGAGGCAAGGATCACTCCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACCCTGCTGCATCTCTTGCAAGTGCTTATAGGAATAGTTTGAGGGTTGCAAAGGAGAAAAACATTCAGTATATTGCATTCCCAGCTATATCATGTGGTGTCTTTGGGTATCCTTATGATGAGGCTGCCACGGTAGCGATTTCTGTCATCAAGGAGTTTCGAAATGAGTTTAAGGAGGTCCACTTTGTTCTGTTCTTAGAAGATATTTATCAAGTTTGGGTAAATAAGGCAAATGATCTTATGAAAAATTAG 606 0.4422 MRCIGNGSASNGESSVVRFPLSPSSSLVIQKGDITKWSIDASSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGVRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLASAYRNSLRVAKEKNIQYIAFPAISCGVFGYPYDEAATVAISVIKEFRNEFKEVHFVLFLEDIYQVWVNKANDLMKN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151186g00005 201 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 26 197 - -
Stsc151186g00005 201 SMART YBR022w_8 26 164 IPR002589 -
Stsc151186g00005 201 Pfam Macro domain 47 164 IPR002589 -
Stsc151186g00005 201 ProSiteProfiles Macro domain profile. 14 199 IPR002589 -
Stsc151186g00005 201 SUPERFAMILY Macro domain-like 16 194 IPR043472 -
Stsc151186g00005 201 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 201 IPR043472 -
Stsc151186g00005 201 CDD Macro_OAADPr_deacetylase 27 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151186g00005 Stsc-Chr151186 47291 49386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151186g00005 32 137 C2H2 Transcription Factor Family AT5G01310 33.613 7.44e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151186g00005 K23518 - qsa:O6P43_020114 330.487