Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151185g00009 ATGGATTCTCTCCCTCAATCGATCGTTTCTGTCTCAAGTTCATCTGGAACGGATCCTAATCTCCACATATTAGGTGACGTTGATGATGATTTTATTTCACAGGTTGGAATGACTTTTCAATCACTTGAAGAAGCTGCTGCTTTCTATAAAGAGTATGCTAGACGTGTTGGGTTTTCTACTAAGATAAGGAACACCAACAGGTGCAAGGAGACGAAGGAAATAAAGAATCAATTAATCACATGTAATAGAGAGGGAAAATGGATCTCTGAGATACCGTACGTTGAGAAGACGAATCCAACGTGTGGTGCAAACTGTCCTGCAAGGATTTATGTGCATGTAGTGAAGAAAACCAAACGTTGGTGTATTTCAAAGGTTGTTCTCCAGCACTCACATCCATGTTTTCCTTATCAAGCTCGGATGTTACCTCAGCATAGGGAGCTAAGCATGCATGTTCGTCACATTATTGAAATTAATGATAAATCTGGTATTAGATCGAATTAG 501 0.3952 MDSLPQSIVSVSSSSGTDPNLHILGDVDDDFISQVGMTFQSLEEAAAFYKEYARRVGFSTKIRNTNRCKETKEIKNQLITCNREGKWISEIPYVEKTNPTCGANCPARIYVHVVKKTKRWCISKVVLQHSHPCFPYQARMLPQHRELSMHVRHIIEINDKSGIRSN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151185g00009 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 164 - -
Stsc151185g00009 166 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151185g00009 Stsc-Chr151185 82416 83370 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151185g00009 FAR1 1.7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151185g00009 - - aip:110271906 183.341