Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151184g00013 ATGATGGTCAAGGAAGATGAACCAACTTTGACAGCAGCCAAGGAACAAGCAGAGGAAGAGATGATGAATGAAGGAAAAAGCAATGAAGAAAGCGATCATGAGAATAATAATCCTCAAGAGTGGTTGAAGTTGAACCTGAGCTTAGGAGGGAATTCACTCTCAACAGCAGGGGACAGTGATTCATCACAAACAAGACCAGTTACTGCAACAAAAGTTTTCTCATGCAACTTCTGCATGAGGAAGTTCTATAGCTCACAAGCATTAGGGGGTCATCAGAACGCTCACAAAAGGGAAAGAGGTGCTGCAAGAAGATATCACTCTCAGAGGACCATGGCCATGATGGGAATGGGATTTCCCATGATGCGATCACTCGGTGTTCAGCCTCATTCACTGGTGCAAAAGCCATGCAGAGGTGGTGGAACTGGAACTGGAGGAGCCATGGTGGCACCAACCTTTCATGATGCATATGCATCATCAGGGCTTGGAATGGCATGGACACCTTTCATGGCTGAGGAGCCAAGTGATCTGGTTTGGCCCGGCAGCTTTCGATTGGTTCCGGAACAACCGGAGCCGCAGCAGGAACCACTGAAACTTGATTTAGACCTCAGACTCTGA 615 0.4764 MMVKEDEPTLTAAKEQAEEEMMNEGKSNEESDHENNNPQEWLKLNLSLGGNSLSTAGDSDSSQTRPVTATKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYHSQRTMAMMGMGFPMMRSLGVQPHSLVQKPCRGGGTGTGGAMVAPTFHDAYASSGLGMAWTPFMAEEPSDLVWPGSFRLVPEQPEPQQEPLKLDLDLRL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151184g00013 204 MobiDBLite consensus disorder prediction 1 37 - -
Stsc151184g00013 204 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Stsc151184g00013 204 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 204 - -
Stsc151184g00013 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Stsc151184g00013 204 SUPERFAMILY beta-beta-alpha zinc fingers 69 99 IPR036236 -
Stsc151184g00013 204 Gene3D Classic Zinc Finger 53 116 - -
Stsc151184g00013 204 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151184g00013 Stsc-Chr151184 69757 71496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151184g00013 2 190 C2H2 Transcription Factor Family AT1G24625 32.323 3.66e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151184g00013 - - gmx:100811125 227.254