Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151184g00001 ATGGAGGCGAAGGATGATTTTGAGGTGGACAATTTGAGCACAGCCACCATCACAGCAACAGGGACAAGTTTCTCTCAACTACTCTTCGGAGATGACGATGATCATCATCAACATGCATTGGGTTTTGCTACTGCTGTGGACCACTACAACAATCACCTCCCTCTTTTCTCCATTGACAAGCCACCCAAAATGCTCTCTTTTGGGGACTTCCATGATGTCGTAGCAGAAGAACAATCCCACCTCTTCCTCCCTCAAAACAACTCCACCCCTCAGAAATCTGTTATCACTTCTAGTGATTCTTCTTCAGCTTCTTCATGCAACCACACCACCGCCGTCATTAACTCCATATCGAAGACCAATAATAGAAAGCGAAATGGGGCGGGGCTACAACCGGTTGTGAAGGTGCCTAATAAGAAGAACAAAGCATCAGAAAATCAGAGTTCAACTTCAACCGGTCATGCAAAGCAGAGGAAGGAGAAACTCGGGGAACGAATTGCAGCATTGCAACAGCTTGTTTCTCCCTTTGGGAAGACAGATACAGCATCGGTGCTTCACGAGGCAATGGGATACATAAGATTTCTCCATGACCAAGTTCAAGTGTTGTGCTCTCCTTACTTGCAGCGCTTGCCTTCTTCATCATCATCATCTTCATTTCAACATCAACGTGGGGAGGAGGGAGATAACAACAATGGGAACGAGGATGTTAAAAAGGACAAGAGGGACTTGAAGAGCATGGGACTCTGCCTCATCCCCCTCCAATGCACCCTACACGTGTCAAGTACCAACGGTGCTGATTTCTGGTCACCTGCTGGTGCACCCAACACTGTTTCACCCTATGCACACCACCTCTCAAAATAG 858 0.4709 MEAKDDFEVDNLSTATITATGTSFSQLLFGDDDDHHQHALGFATAVDHYNNHLPLFSIDKPPKMLSFGDFHDVVAEEQSHLFLPQNNSTPQKSVITSSDSSSASSCNHTTAVINSISKTNNRKRNGAGLQPVVKVPNKKNKASENQSSTSTGHAKQRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQRLPSSSSSSSFQHQRGEEGDNNNGNEDVKKDKRDLKSMGLCLIPLQCTLHVSSTNGADFWSPAGAPNTVSPYAHHLSK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151184g00001 285 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 66 258 - -
Stsc151184g00001 285 MobiDBLite consensus disorder prediction 84 160 - -
Stsc151184g00001 285 CDD bHLH_AtbHLH_like 154 201 IPR045239 -
Stsc151184g00001 285 MobiDBLite consensus disorder prediction 212 237 - -
Stsc151184g00001 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Stsc151184g00001 285 Gene3D - 151 211 IPR036638 GO:0046983
Stsc151184g00001 285 MobiDBLite consensus disorder prediction 84 126 - -
Stsc151184g00001 285 FunFam Transcription factor bHLH113 137 208 - -
Stsc151184g00001 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 206 IPR036638 GO:0046983
Stsc151184g00001 285 SMART finulus 151 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151184g00001 Stsc-Chr151184 8632 10494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151184g00001 140 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 47.794 2.69e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151184g00001 - - ahf:112711948 400.593