Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151182g00004 ATGCCTTCCATTTTCTTCTTCTGCTTCCTCCTCTTGCAATGCATCTCACGTTCTTCTTCTTCGTTAGAATCACCCAATAACAATGTGGCAAAGAAGAAAACCTACATTGTTCACATGAACCACAACCAAAAGCCTTCCATATACCCCACCCACCATGACTGGTACATCGCAAGCCTTCAATCTCTCTCAACTAACTCAGATTCAGATTCAGATTCGGATCCACTTCTCTATTCTTACAAAACTGCTTACAACGGTTTTGCTGCTTCTCTTGACCAAAACCAGGCCCAAGCCCTTCTAGGCTCGGGCTCAGTCCTTGGTCTTTACGAGGACACACTCTACCAACTCCACACTACAAGAACACCCGAGTTCTTGGGCCTCGAAACTCAAACCAGCCTGTGGGCCGGACACAGTACCGAGGACCTAGGCCAGGCCCTCCATGACGTAATCATCGGCGTACTCGACACCGGCGTCTGGCCGGAATCCAGAAGCTTCGATGACGCAGGGATGCCTAAGATCCCGGCCCGGTGGCGCGGAGAATGCGAATCAGGCGAAGATTTCTCCCCAAAACTCTGCAACAAGAAGCTCATCGGGGCCCGAAGCTTCTCCAGAGGGTTCCGCATGGCTTCCGGAGATTTCGGAAGCGGCAAACCAAAGGAGCCTGTGTCCCCACGCGACAAAGACGGCCATGGAACTCACACCGTGAGCACCGCAGCTGGCTCTCCGGTGGCTAATGCAAGCCTCTTAGGCTACGCCACCGGAACGGCCCGCGGGATGGCCCCGCAGGCCCGTGTGGCGGCCTACAAGGTATGCTGGACAGACGGTTGTTTCGCCTCCGACATTCTCGCCGGAATTGACCGCGCAATTGAAGACGGCGTGGACGTGCTCTCGCTGTCCCTCGGCGGCGGCTCCGCCCCTTACTTCCGGGACACGATCGCGATCGGCGCGTTTGCGGCGGTTGAGAAAGGGATCTTCGTGGCATGCTCCGCGGGGAACAGTGGACCCACTAAGAGCTCACTTGCCAACGTGGCACCTTGGATTATGACCGTTGGGGCAGGTACGCTTGACCGTGACTTCCCTGCTTTTGCGGTTCTTGGAAACAAGAAGAGGTTTTCTGGGGTTTCGCTTTATAGTGGGAAAGGGATGGGAGCTGAACCGGTCAGCTTGGTTTATTTTAAGAATTCGAGCAAGTCTAGTAACATTTGTTTGCCCGGTTCGCTTGACCCGGCTTTGGTTCGGGGGAAGGTGGTTCTTTGTGATAGGGGGATGAATGCGAGGGTTGAGAAGGGGCGGGTTGTGAGGGACGCCGGTGGTGTTGGCATGATTCTTGCCAACACGGCGGAGAGTGGGGAGGAGTTGGTGGCGGATAGTCATTTGTTGCCGGCGGTGGCTGTGGGGAGGATTGTTGGGGACCAGATCAGGGAGTATGTCGGGTCGGATCCGAGGGCAACAGCGGTTTTGAGCTTCGGTGGGACGGTTTTGAACGTTAGGCCGTCGCCTATTGTGGCTGCTTTCAGTTCGAGAGGGCCCAACACTGTGACGAGGCAGATACTGAAACCTGATGTTATTGGGCCTGGTGTCAATATTCTTGCTGCTTGGTCAGAAGCTATTGGGCCTTCTGGCCTGGCTCAGGACACTCGCAAGACTAACTTCAACATCATGTCAGGTACTTCAATGTCATGCCCACACATAAGTGGGTTGGCTGCGTTGCTTAAAGCAGCTCACCCAGAATGGAGTCCCAGTGCAATCAAATCGGCACTCATGACAACGGCCTACACCCATGACAACAACCGGTCGCAACTCCATGATGCCGCCTTAGGATCGTTCTCCAACCCATGGGCTCACGGTTCAGGCCACGTCAACCCACAGAAGGCTCTCTCCCCTGGCCTAGTCTATGATGCTTCCACAAGTGACTATGTTAAATTCCTGTGCTCCTTGGACTATAGCCAAGAACAATTGCAAATCTTAATCAAGCACTCTGGTTTCAATTGCACCAAGAAGTTCTCTGACCCTGGCCAATTGAATTACCCTTCATTCTCGGTTATATTTGGAGACAAGAGGGTTGTCCGGTATACTCGGAGGCTGACCAACGTTGGCGATGCCGGTTCGGTCTACAGGGTGACCGTGGATGCGCCGCCGGGTGTGAGCATAACGGTGAAACCCACCAGGCTTGTGTTTGACAAAGTTGGGGAGAGGAAGGCCTACACCGTGACCTTTGTTTCCAACAAGGGTGCTAAAGAAGCAGCTAGATATGGGTTTGGTAGCATCGTGTGGAGAAATCCCCAGCACCAAGTTAAAAGCCCAGTAGCTATTGCTTGGTCAGCATTGTGA 2328 0.5387 MPSIFFFCFLLLQCISRSSSSLESPNNNVAKKKTYIVHMNHNQKPSIYPTHHDWYIASLQSLSTNSDSDSDSDPLLYSYKTAYNGFAASLDQNQAQALLGSGSVLGLYEDTLYQLHTTRTPEFLGLETQTSLWAGHSTEDLGQALHDVIIGVLDTGVWPESRSFDDAGMPKIPARWRGECESGEDFSPKLCNKKLIGARSFSRGFRMASGDFGSGKPKEPVSPRDKDGHGTHTVSTAAGSPVANASLLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGIDRAIEDGVDVLSLSLGGGSAPYFRDTIAIGAFAAVEKGIFVACSAGNSGPTKSSLANVAPWIMTVGAGTLDRDFPAFAVLGNKKRFSGVSLYSGKGMGAEPVSLVYFKNSSKSSNICLPGSLDPALVRGKVVLCDRGMNARVEKGRVVRDAGGVGMILANTAESGEELVADSHLLPAVAVGRIVGDQIREYVGSDPRATAVLSFGGTVLNVRPSPIVAAFSSRGPNTVTRQILKPDVIGPGVNILAAWSEAIGPSGLAQDTRKTNFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTHDNNRSQLHDAALGSFSNPWAHGSGHVNPQKALSPGLVYDASTSDYVKFLCSLDYSQEQLQILIKHSGFNCTKKFSDPGQLNYPSFSVIFGDKRVVRYTRRLTNVGDAGSVYRVTVDAPPGVSITVKPTRLVFDKVGERKAYTVTFVSNKGAKEAARYGFGSIVWRNPQHQVKSPVAIAWSAL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151182g00004 775 Gene3D Peptidase S8/S53 domain 147 638 IPR036852 GO:0004252|GO:0006508
Stsc151182g00004 775 ProSiteProfiles Serine proteases, subtilase domain profile. 121 625 - -
Stsc151182g00004 775 SUPERFAMILY Subtilisin-like 115 629 IPR036852 GO:0004252|GO:0006508
Stsc151182g00004 775 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Stsc151182g00004 775 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Stsc151182g00004 775 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Stsc151182g00004 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 769 IPR045051 -
Stsc151182g00004 775 MobiDBLite consensus disorder prediction 209 237 - -
Stsc151182g00004 775 Pfam Peptidase inhibitor I9 34 116 IPR010259 -
Stsc151182g00004 775 Gene3D - 642 772 - -
Stsc151182g00004 775 FunFam Subtilisin-like protease SBT1.9 23 116 - -
Stsc151182g00004 775 FunFam Subtilisin-like protease SBT1.5 642 773 - -
Stsc151182g00004 775 CDD Peptidases_S8_3 113 591 IPR034197 -
Stsc151182g00004 775 FunFam subtilisin-like protease SBT1.5 355 493 - -
Stsc151182g00004 775 FunFam Subtilisin-like protease SBT1.5 147 368 - -
Stsc151182g00004 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Stsc151182g00004 775 Pfam Subtilase family 147 596 IPR000209 GO:0006508|GO:0008236
Stsc151182g00004 775 Pfam PA domain 394 472 IPR003137 -
Stsc151182g00004 775 CDD PA_subtilisin_like 363 484 - -
Stsc151182g00004 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 116 IPR037045 -
Stsc151182g00004 775 Gene3D - 355 493 - -
Stsc151182g00004 775 Pfam Fibronectin type-III domain 672 770 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151182g00004 Stsc-Chr151182 32832 36118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151182g00004 7 773 Subtilisin-like Serine Gene Family AT2G05920 67.839 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151182g00004 - - gmx:100797543 1186.02