Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151181g00015 ATGGGTATGTACAAGACACACTTATTTATGAATCCTGGAATATTTGTGTGCACACTTGAGGCAAGCAGAAAAATATTGAGTGATGACAATAAATTTAAGCTAGGTTATCCCGAAACCACTTTAACGGTGACACAGTCACCGTTGACCCATGTATCCGGCGAAGAGCACAATCATTTCCGGCGACTGATAATCGCCTCCATTCTGGGCTACAATTCTTTAGCCAAGTTTCTAAATCCAATCGAGGATATTGTGATTGAATCTCTGAAAGGAATGGCGAGCAGAAGCACAGAACAAGCTATTATGCTGATGGAGGAGACCATGGCTCTGTCCTTAAGAGTCATCGTTCACATCTTCATAGGATCTTACCATCATCATGATACAATCAAACAAGTTGAACATTTGCTTGCTGCTGTTGATGATGCCTTGTTCTCTTTGCCAATCAATTTCCCTGCTTTTCCTTATTATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATACTTAAATCGATTGTGGAGGAAAGGAAGGTGATGATAAAAGATGGTAGTAAAGTGACAGAAAAGAAAGATCTTGTTGATATTCTTCTGGAAATGGAGGATGTGAATGGTCGAAAATTGAAGGGTGAAGACATTGTTAACACGTTGATCATGTTATTTTTGGCTGGTCATGTAACTACAGCGACGGCATTAATGTGGTCTGTCATATTTCTCACAAACAACACCCTCGCCTTCAAGAAAGCCAAAGAAGAACAGGAAGAAATCTTGAGGTCAAGGCCACCTTCGCAAAAACATTTAAGCATTGAAGAAATTAAGAAAATGGTTTACCTTACAAAGGTATTTAATGAAGTGATTCGCGTAACGGAGTGGGCAATTCCCCTCTGTCGAGAAGCAACTACCGATGTGGATATCAATGGTTATATTATACCCAAAGGATGGAGAGTGTTTATTTGGCAAAGAGGTTGCCATCGATCTTCTGAATATTTTTCAAACCCGGAAGACTTTAATCCCTCCAGATGGGATGACGATGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTTGGTGTTGGAACAAGGATGTGTGTTGGAAGAGATCTTCTCAAAATTGAAATGCTCATTTTTCTGCACCATTTCATCCTGAATTATAAGTTCGAGCAAAAAAATCCAGAATGTCCTCTCTCTTACATGCTAGCACCGGTGCCTAAAGATAACTGCCTTGGCAAGATGACAAAGGTGTCCATGGAATAA 1245 0.3984 MGMYKTHLFMNPGIFVCTLEASRKILSDDNKFKLGYPETTLTVTQSPLTHVSGEEHNHFRRLIIASILGYNSLAKFLNPIEDIVIESLKGMASRSTEQAIMLMEETMALSLRVIVHIFIGSYHHHDTIKQVEHLLAAVDDALFSLPINFPAFPYYKALKNRKKVEEILKSIVEERKVMIKDGSKVTEKKDLVDILLEMEDVNGRKLKGEDIVNTLIMLFLAGHVTTATALMWSVIFLTNNTLAFKKAKEEQEEILRSRPPSQKHLSIEEIKKMVYLTKVFNEVIRVTEWAIPLCREATTDVDINGYIIPKGWRVFIWQRGCHRSSEYFSNPEDFNPSRWDDDDFTKGGAFFPFGVGTRMCVGRDLLKIEMLIFLHHFILNYKFEQKNPECPLSYMLAPVPKDNCLGKMTKVSME 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151181g00015 414 PRINTS E-class P450 group I signature 230 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS E-class P450 group I signature 360 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS E-class P450 group I signature 210 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS E-class P450 group I signature 350 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 SUPERFAMILY Cytochrome P450 3 402 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 353 362 IPR017972 GO:0005506|GO:0016705
Stsc151181g00015 414 PANTHER CYTOCHROME P450 26 3 391 - -
Stsc151181g00015 414 PRINTS P450 superfamily signature 351 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS P450 superfamily signature 221 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 Gene3D Cytochrome P450 1 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00015 414 Pfam Cytochrome P450 4 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151181g00015 Stsc-Chr151181 86915 90392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151181g00015 2 409 Cytochrome P450 AT1G05160 38.631 4.72e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151181g00015 K04123 - aip:107647938 583.948