Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151181g00013 ATGGTGGGAATAGAAATGGAGGAAGTAATAAGTTGGGTATTATGGTTTATGATGATGAGTGGTGCCACTTTGTTGGCATGCTACTTTGTTGTGAACACGATGGGGAGAAGGTTGAACGAATGGTATTATGATTTCAAGTTAGGAGACAAGCGTCGATTGTTGCCTCCTGGTGACATGGGTTGGCCTCTTATTGGAAAAACCATGTTCTTTATCAAACACTTGAGATCTGGATGCACTCATCCTGATTTGTTCATCAACGATCTTCTTTTCAAACATGGAAAAATTGGTATGTACAAGACACATTTGTTTATGAATCCTGGAATATTTATGTGCACACTGGAGGCAAGCAGAAAAGTGTTGAGTGATGACAATAAATTTAAGCTAGGTTATCCAGAAACCACTTTAACGATGATACAGTCACCGTTGACCAATGTGTCCAGCGAAGAGCACAAACGTTTCCGACGACTGGTAATGGCCCCCATTCTGGGCTACAATTCTTTAAACAAGTTTCTAAATCCAATTGAGGACATTGTGATTGAATCGCTGGAAGGAATGAGGAGCAGAAGCACAAAACAACCTATTATGTTGATCAATGAGACCATGGATCTCTCCTTAAGAGTCATCGTTCACATCTTTATAGGAACTTACCATCATCACGATACAATCAAACACGTTGAACATTTGCTTGGTGCTCTTCATGATGCTTTGTTCTCTTTGCCAATTAATTTCCCCGGTTTTCCTTATTATAAAGCACTCAAGAATCGTAAGAAGGTGGAAGAAATACTTAAATCAATTGTGGAGGAAAGGAAGGTGACGATAAAAGATGGTAGTGAAGTGACAGAAAAGAAAGATCTTGTTGATATTCTTCTGGAAGTGGAGGATGTGAATGGTCGAAAATTGAAGGGTGAAGACATTGTTAACACGTTGATCGCGTTATTTTTGGCTGGTCATTTAAGTTCAGCAACGGCATTAATGTGGTCTGTGATATATCTCACAAACAACACCCTCGCCTTCAAGAAAGCCAAGGAAGAACAGGAAGAGATCTTGAAATCAAGGCCACCTTCGCAAAAGCATTTAAGCATTGAAGAGATTAAGAAAATGATTTACCTTACTAAGGTAATTAATGAAGTGATACGCATAACGGAGTGGTCTGTTCCCCTCTGTCGAGAAGCAACTACCGATGTGGATATCAACGGTTATATCATACCTAAAGGATGGAAAGTGTTTATTTGGCAGAGATGTTGTCATCGGTCTTCCGAATATTTTCCAAATCCAAAAGACTTTAATCCCTTCCGATGGGATAGTGATGATTTTACAAAAGGAGGAGCTTTCTTTCCTTTTGGGGTTGGAACAAGAATGTGCCCCGGAAGAGATCTCATCAAAATTGAAATGCTCATCTTTCTGCATCATTTCCTCCTTAATTATAAGTTTGAGCAAATAAATACAAGATGTCCTCTCTCTTACATGCCAACACCGGTGCCTAAAGATAACTGCCTTGGCAAGGTCATTAATGAAGTGATACGCGTAACGGAGTGGTCTGTTCCCCTCTGTCGAGAAGCAACTACCGATGTGGATATCAACGGTTATATCATACCCAAAGGATGGAAAGTGTTTATTTGGCAGAGATGTTGTCATCGATCTTCCGAATATTTTCCAAATCCGAAAGACTTTAATCCCTCCAGATGGGATAGTGATGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTTGGAGTTGGAACAAGAATGTGCCCTGGAAGAGATCTCATCAAAATTGAAATGCTCATCTTTCTGCATCATTTCCTCCTTAATTATAAGTTTGAACAAATAAATCCAAAATGTCCTTTCTCTTACATGCCAATGCCGGTGCCTAAAGATAACTGCCTTGGCAAGGTGACAAAGGTGTCCATGGAATAG 1914 0.3981 MVGIEMEEVISWVLWFMMMSGATLLACYFVVNTMGRRLNEWYYDFKLGDKRRLLPPGDMGWPLIGKTMFFIKHLRSGCTHPDLFINDLLFKHGKIGMYKTHLFMNPGIFMCTLEASRKVLSDDNKFKLGYPETTLTMIQSPLTNVSSEEHKRFRRLVMAPILGYNSLNKFLNPIEDIVIESLEGMRSRSTKQPIMLINETMDLSLRVIVHIFIGTYHHHDTIKHVEHLLGALHDALFSLPINFPGFPYYKALKNRKKVEEILKSIVEERKVTIKDGSEVTEKKDLVDILLEVEDVNGRKLKGEDIVNTLIALFLAGHLSSATALMWSVIYLTNNTLAFKKAKEEQEEILKSRPPSQKHLSIEEIKKMIYLTKVINEVIRITEWSVPLCREATTDVDINGYIIPKGWKVFIWQRCCHRSSEYFPNPKDFNPFRWDSDDFTKGGAFFPFGVGTRMCPGRDLIKIEMLIFLHHFLLNYKFEQINTRCPLSYMPTPVPKDNCLGKVINEVIRVTEWSVPLCREATTDVDINGYIIPKGWKVFIWQRCCHRSSEYFPNPKDFNPSRWDSDDFTKGGAFFPFGVGTRMCPGRDLIKIEMLIFLHHFLLNYKFEQINPKCPFSYMPMPVPKDNCLGKVTKVSME 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151181g00013 637 Pfam Cytochrome P450 55 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 Pfam Cytochrome P450 499 609 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc151181g00013 637 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 576 585 IPR017972 GO:0005506|GO:0016705
Stsc151181g00013 637 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS E-class P450 group I signature 573 583 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS E-class P450 group I signature 540 564 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS E-class P450 group I signature 583 606 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 SUPERFAMILY Cytochrome P450 50 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PANTHER CYTOCHROME P450 26 51 494 - -
Stsc151181g00013 637 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 SUPERFAMILY Cytochrome P450 498 624 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 Gene3D Cytochrome P450 500 634 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00013 637 Gene3D Cytochrome P450 47 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151181g00013 Stsc-Chr151181 73389 80859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151181g00013 499 632 Cytochrome P450 AT1G05160 51.493 7.00e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151181g00013 K04123 - adu:107492701 642.499