Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151181g00009 ATGGGAATGGAAATGGAGTTAGGAAGTTGGGTATGGATGAGTTGTGCGACATTGTTGGCATGTTACTTTGTAGTAAACACATTTGGGAGAAGAGTGAATGAGTGGTATTATGATTTCAAGTTGGGACACAACCACCGTCTGCTGCCGCCTGGTGACATGGGATGGCCTCTTATCGGCAAAACTTGGCACTATTTCAACAACCCTCATTTATTCATGGACAATCTTATTTCCAAATACGGAGAAATTGGTATGTACAAGACACACTTATTCATGAAGCCAACTATTATATTGTGCAATCTAGAGGCCTCAAGGAAAGTGCTAACTGATGACAAAAACTTTAGACTTGCTTATCCTGAAACCGCCATAACAGTGGTTAAAACGATCTTATATGAAGTGTCAAGTGAGGATCACAAGCGTTTTCGACGCCTTGTGACTTCCCCTATCATGGGTTACAATGCTTTGGCCATGTTTGTAGAACGCATCGAGGACATTGTTGTCAATTCACTCCAGAGAATGGCTAGTAATAGCATGGAAAAGCCTATTGAGGTCTTCAAGGAGACCAAGTCTCTTACCATGAGAGTCATCCTTCAGATCTTCATGGGATCTCACAATCAAAAAATAATTGACCAAGTTGAAAATTTGTTTGGTGATATCAACGATGCCTTGTTCTCTTGGCCAATTAAATTACCTGGTTTTTCTTATTACAATGCACTCAAGAATCGTAAGATGGTGGAAAAGATAGTTAATTCTGTTGTGGAGGATAGAAAGATGATGCTAGAAAATGGTGAAATTTTATCGGAGAAGAAAGATCTTGTGGATGTTCTTCTGGAATTGGAGGATGTAAATGGCCGAAAATTGAAGAGTGAAGACATTATTGACTTGCTGATATTATTCTTAATAGCTGGTCATCTAAGTACAGCTACGGTTATAATGTGGGCAATGGTTTACCTTACTAACAATCCACTTGTCATCAAGAAAGCTAAGGAGGAACAGGAAGAAATTGTGAAGTCAAGGCCACCTTCGCAACAGTATTTAAGTATTGAGGAAATTAAGCAAATGGTTTATCTTACCAAGGTAACTAACGAAGTGCTGCGCATGAGTGATTTCGCCATTCCACTTTCTCGAGAAGCAACTACAGATGTGAACATCAATGGTTATATGATACCAAAAGGATGGAGAACGGTGGTTTGGCAGAATGCTTGTCACATGTCTTCTAAATATTTTAAAAATCCTGAAGAGTTTGCTCCTTCCAGATGGGATGATAATAATAAATATACAAATGGAACAGCCTTCTTTCCTTTTGGAGTTGGAACAAGAATGTGCCCTGGAAGAGATCTAACCAAAATGGAAATGCTCATCTTTCTGCATCATTTCGTTCGTAATTATAAGTTTGAGCAAATGAATCCAAAATGCCCTGTCTCGTACTTTCCACTACCTGTGCCTAATGATAATTGTCTTGCTAAGGTCTCCAAGATCTGA 1479 0.3908 MGMEMELGSWVWMSCATLLACYFVVNTFGRRVNEWYYDFKLGHNHRLLPPGDMGWPLIGKTWHYFNNPHLFMDNLISKYGEIGMYKTHLFMKPTIILCNLEASRKVLTDDKNFRLAYPETAITVVKTILYEVSSEDHKRFRRLVTSPIMGYNALAMFVERIEDIVVNSLQRMASNSMEKPIEVFKETKSLTMRVILQIFMGSHNQKIIDQVENLFGDINDALFSWPIKLPGFSYYNALKNRKMVEKIVNSVVEDRKMMLENGEILSEKKDLVDVLLELEDVNGRKLKSEDIIDLLILFLIAGHLSTATVIMWAMVYLTNNPLVIKKAKEEQEEIVKSRPPSQQYLSIEEIKQMVYLTKVTNEVLRMSDFAIPLSREATTDVNINGYMIPKGWRTVVWQNACHMSSKYFKNPEEFAPSRWDDNNKYTNGTAFFPFGVGTRMCPGRDLTKMEMLIFLHHFVRNYKFEQMNPKCPVSYFPLPVPNDNCLAKVSKI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151181g00009 492 PANTHER CYTOCHROME P450 26 45 477 - -
Stsc151181g00009 492 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 Gene3D Cytochrome P450 40 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 Pfam Cytochrome P450 49 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Stsc151181g00009 492 SUPERFAMILY Cytochrome P450 48 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151181g00009 492 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151181g00009 Stsc-Chr151181 51037 54948 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151181g00009 6 490 Cytochrome P450 AT1G05160 39.959 1.00e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151181g00009 K04123 - adu:107492701 769.229