Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151180g00009 ATGGCAGTGACAGTTGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGCTTGGATGGGGACAAGAAAACCTCTATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACCGATTATTCTATGCCGGGGATGACTGGTTATGATCTCCTCAAGAAAATCAAGGAATCGTCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCATCGGAGAATATCTTGACTCGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATTGCGATCCGACGATTGCAGCCCCTCGTCAACGACTCATCCCTGCGATTCATCGCCGTTGTCATCACCATTGTCTTCATCTTCACTACTTTCGCAATTGTCGCCATCTACCTTGTCCTCCAAGAAATCTAGATTGTGA 498 0.4357 MAVTVVESGTRALQYLGLDGDKKTSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGEKRCCKRLRSDDCSPSSTTHPCDSSPLSSPLSSSSLLSQLSPSTLSSKKSRL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151180g00009 165 SMART REC_2 1 102 IPR001789 GO:0000160
Stsc151180g00009 165 MobiDBLite consensus disorder prediction 124 165 - -
Stsc151180g00009 165 Gene3D - 1 131 - -
Stsc151180g00009 165 MobiDBLite consensus disorder prediction 122 165 - -
Stsc151180g00009 165 Pfam Response regulator receiver domain 3 99 IPR001789 GO:0000160
Stsc151180g00009 165 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 123 IPR045279 GO:0009736
Stsc151180g00009 165 SUPERFAMILY CheY-like 3 105 IPR011006 -
Stsc151180g00009 165 ProSiteProfiles Response regulatory domain profile. 1 106 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151180g00009 Stsc-Chr151180 40091 41599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151180g00009 3 126 Response Regulator Gene Family AT3G48100 72.000 2.27e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151180g00009 Response_reg 8.7e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151180g00009 K14492 - gmx:100796843 218.009