Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151180g00008 | ATGGCTGCTGCTGGTGTTGGTGAAGTTTTGAGGCAGAATTTGCCTGAGAAGCTGGAGGAATCTCCTTCTGGTGCTGCAAATGAGCTTCATGTTCTAGCTGTTGATGACAGTCTTGTGGATAGAAAGGTCATTGAACGCTTGCTCAAGATATCTTCTTGCAAAGTGACAGTTGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGCTTGGATGGGGACAAGAAAACCTCTATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACCGATTATTCTATGCCGGGGATGACTGGTTATGATCTCCTCAAGAAAATCAAGGAATCGTCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCATCGGAGAATATCTTGACTCGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATTGCGATCCGACGATTGCAGCCCCTCGTCAACGACTCATCCCTGCGATTCATCGCCGTTGTCATCACCATTGTCTTCATCTTCACTACTTTCGCAATTGTCGCCATCTACCTTGTCCTCCAAGAAATCTAGATTGTGA | 654 | 0.4388 | MAAAGVGEVLRQNLPEKLEESPSGAANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKTSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGEKRCCKRLRSDDCSPSSTTHPCDSSPLSSPLSSSSLLSQLSPSTLSSKKSRL | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151180g00008 | 217 | ProSiteProfiles | Response regulatory domain profile. | 30 | 158 | IPR001789 | GO:0000160 | |
Stsc151180g00008 | 217 | MobiDBLite | consensus disorder prediction | 176 | 217 | - | - | |
Stsc151180g00008 | 217 | Gene3D | - | 29 | 182 | - | - | |
Stsc151180g00008 | 217 | Pfam | Response regulator receiver domain | 31 | 151 | IPR001789 | GO:0000160 | |
Stsc151180g00008 | 217 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 29 | 174 | IPR045279 | GO:0009736 | |
Stsc151180g00008 | 217 | SMART | REC_2 | 29 | 154 | IPR001789 | GO:0000160 | |
Stsc151180g00008 | 217 | MobiDBLite | consensus disorder prediction | 174 | 217 | - | - | |
Stsc151180g00008 | 217 | CDD | REC_typeA_ARR | 31 | 153 | - | - | |
Stsc151180g00008 | 217 | SUPERFAMILY | CheY-like | 27 | 156 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151180g00008 | Stsc-Chr151180 | 39746 | 41599 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151180g00008 | 6 | 172 | Response Regulator Gene Family | AT3G48100 | 69.048 | 9.34e-79 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Stsc151180g00008 | Response_reg | 9.5e-21 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151180g00008 | K14492 | - | gmx:100796843 | 286.189 |