Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151180g00008 ATGGCTGCTGCTGGTGTTGGTGAAGTTTTGAGGCAGAATTTGCCTGAGAAGCTGGAGGAATCTCCTTCTGGTGCTGCAAATGAGCTTCATGTTCTAGCTGTTGATGACAGTCTTGTGGATAGAAAGGTCATTGAACGCTTGCTCAAGATATCTTCTTGCAAAGTGACAGTTGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGCTTGGATGGGGACAAGAAAACCTCTATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACCGATTATTCTATGCCGGGGATGACTGGTTATGATCTCCTCAAGAAAATCAAGGAATCGTCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCATCGGAGAATATCTTGACTCGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATTGCGATCCGACGATTGCAGCCCCTCGTCAACGACTCATCCCTGCGATTCATCGCCGTTGTCATCACCATTGTCTTCATCTTCACTACTTTCGCAATTGTCGCCATCTACCTTGTCCTCCAAGAAATCTAGATTGTGA 654 0.4388 MAAAGVGEVLRQNLPEKLEESPSGAANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKTSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGEKRCCKRLRSDDCSPSSTTHPCDSSPLSSPLSSSSLLSQLSPSTLSSKKSRL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151180g00008 217 ProSiteProfiles Response regulatory domain profile. 30 158 IPR001789 GO:0000160
Stsc151180g00008 217 MobiDBLite consensus disorder prediction 176 217 - -
Stsc151180g00008 217 Gene3D - 29 182 - -
Stsc151180g00008 217 Pfam Response regulator receiver domain 31 151 IPR001789 GO:0000160
Stsc151180g00008 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 174 IPR045279 GO:0009736
Stsc151180g00008 217 SMART REC_2 29 154 IPR001789 GO:0000160
Stsc151180g00008 217 MobiDBLite consensus disorder prediction 174 217 - -
Stsc151180g00008 217 CDD REC_typeA_ARR 31 153 - -
Stsc151180g00008 217 SUPERFAMILY CheY-like 27 156 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151180g00008 Stsc-Chr151180 39746 41599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151180g00008 6 172 Response Regulator Gene Family AT3G48100 69.048 9.34e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151180g00008 Response_reg 9.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151180g00008 K14492 - gmx:100796843 286.189