Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151178g00014 ATGGATGAAACCTCCGCCGCTGCTAATTGGATCGACGGAATATTAAAGGATCTAATCCACACCTCCAACACCGTCTCCATCCCTCAACTCATCAACAATGTTAGGGAGATTATTTACCCTTGCAACCCAAACTTGGCCATGCTCCTTGAGTACAGGCTCCGCCTCCTCACAACTGACTCCTCCTCCGCCGCAGCCGCAGCCGCAGCCGCATCAACACCGCCACTACCACCGCCTCCACAAAACAAACCTCACCTTATGAAGCAAACAAATTCTACTCCTCACATGCATGCGTACAGCACGATGCATTTTCAAGATTCACCGGTAGTGAGTCAATACTGGCCGGTAGCACCGCCACCGCCGTTAGATTCAAACAACAACAATACTTTACAATCGCCGCCGCCGCAGCAAGAGAAGCCACCTCAAGAAGAAGATCTTGCTCCGGCAACAGCACCGCAAAACACCGCCAGCACCGCCACGGAAATGGCTATGCTAGCGAGAAAGAAAGCTGAGGAGATGAATCTACAAAAGAAGAAAGACGAAGAAGGCTTACACCTCCTCACGCTGCTCCTCCAGTGCGCGGAGGCGGTTTCAGCGGAGAATCTAGAAGACGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCGACTCCGTTCGGCACGTCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTGAGCTCTTGCCTCGGAATCTACGCAACGCTTCCGATCGTCCCTCACAGCCAGAAAGTGGCTTCGGCATTCCAAGTCTTCAACGGAATCAGCCCCTTCGTCAAGTTCTCTCACTTCACCGCGAACCAGGCTATTCAAGAAGCGTTTGAGAGAGAAGAAAGGGTTCATATTATAGATCTGGATATAATGCAAGGCCTCCAGTGGCCGGGGCTCTTCCATATACTGGCTTCGAGGCCCGGTGGGCCTCCTTACGTGAGGCTCACCGGCCTCGGAACCTCGATGGAAGCGCTCGAGGCCACTGGAAAGCGGTTATCGGATTTCGCCAATAAGCTTGGGCTCCCGTTTGAATTCTTTGGGGTTGCTGAGAAAGTTGGGAATGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCAGACACAAACACTTTGTGGCTTTTGCAGAGGTTAGCACCTAAGGTAGTGACAGTGGTAGAGCAAGACCTAAGCAACACAGGTTCATTCCTGGGAAGGTTTGTGGAAGCCATACACTACTATTCAGCATTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTACTCTCGAGAGAGATACGGAATGTTCTAGCGGTCGGAGGACCATCAAGGACCGGGGAGCCAAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGGTTTAGAGGTATATCACTAGCTGGTAATGCTGCTACCCAAGCAAGCTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGGATTCTAAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCATGGAGACCACCTTATACCACTACAATTGCTCATCATAGTTAA 1659 0.5021 MDETSAAANWIDGILKDLIHTSNTVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTTDSSSAAAAAAAASTPPLPPPPQNKPHLMKQTNSTPHMHAYSTMHFQDSPVVSQYWPVAPPPPLDSNNNNTLQSPPPQQEKPPQEEDLAPATAPQNTASTATEMAMLARKKAEEMNLQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTTIAHHS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151178g00014 552 ProSiteProfiles GRAS family profile. 176 541 IPR005202 -
Stsc151178g00014 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 158 536 IPR005202 -
Stsc151178g00014 552 MobiDBLite consensus disorder prediction 110 155 - -
Stsc151178g00014 552 MobiDBLite consensus disorder prediction 67 90 - -
Stsc151178g00014 552 Pfam GRAS domain family 186 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151178g00014 Stsc-Chr151178 84220 87360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151178g00014 10 542 GRAS Transcription Factor Family AT3G54220 70.205 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc151178g00014 GRAS 5.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151178g00014 - - gmx:100803919 808.135