Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151178g00010 ATGGCTTTCAATTTGAATTCCCTCAAGCTTGTTCTTGTCTTCATCACCATTTTCCCAATCACTAAAGCTAAGGAACTCGATTACCAAGGCCCAGTCTGTTCAGAAGATAGGACCACTTCTAACACCACCTACCAACTCAACCTCTTCACACTCTTCTCTTCCTTGTCTTCCAAAGCCACCACCACCATATTTTACAACAACACTATCATGGCAGACAAAGATTCTTCTAATGCAGTCTATGGACTATTCATGTGCAGGGGAGATGCACCCTTTGATGTTTGTGGAGATTGTGTTCAATCTGCAACACATGTTCTCTCTTCAGAGTGCACCTTATCCCTTTGGGGTATGATCTGGTATGAACAATGCATGGTTCGATATTCCAACACTTCTTTCTTCTCTGTTCCTTCCACACAGCCCTCCAATCTCATGTCCAACAACTTCAATGTTTCCACCAATCAAACAATGTTTGTCTCTTTGCTTGTAACCACCATGAACAAAACTGCGGATGAAGCTGCCTTTTCTCTTAACAAATATGCCACAAAGGAGCAAAAGGTAACTGAAGTCCAAACAATCTTTAATCTTGCTCAGTGCACAAAGGATCTCTCTGTTCAAGATTGTAGAACATGTCTTGGATTCGCCGTAGCGCAGATCCCGGTATGCTGTAAAGGAAGACGAGGAGGCAGAGTATTGCTCCCAAGCTGTAACATTAGGTTTGAATTATATCCTTTCTATCGCCACGGATCACCTGAACTGTTTGTTCCGGCTACAAAGTATCCAAGTATCGACTCAAAATATTCGCAAGATCCGGTGTATTTATCTCACAAGTGTTTAACAACTAATTATCAAACAACACTTGACAAAAAAAGAATCACCACTCTCCTCGCTTACTTGTCTTCCAAGGCAAGAAACTCAAACAATAAGGACGACTTCCAGATGACAAATGTAGACAACAAAGTATTTGGGCTGTACTTATGCCGCGGTGACATCCCTTCCTCACTCTGTGCTGAATGCATCGTGAACGCCACGGATCGAATAGCCTCGGAGTGTCCAATGTCCATAGAAGCGATGATCTGGTACAACTATTGCTTACTTCGCTACTCGAACTACTCTTTCTTTAGAACAATGAGCACTAGTCCGAGATTCGAGTCGATGAATGTGACCAAGTATGAGGATTACAAAAGCTACTACAAGTACCAATTGTGGAGTGCACTAACGAAGGTGGCCGGAGATATTTGGGACAGGAATGATAGATATTGCAAAGAAACATTTGTGTTGAACGAGGTACAGAGGCTGTATGTGCAGGGGCAGTGCACCAAAGATTTGTCAACCGGGGATTGTAATTACTGCATACATGATGTGATCGAAAATGCGATTCCATGGTCTCGTTTGGGAAGCGTAGGTGGAAGAGTTTTGTATCCAAGCTGCACTTTGAGGTTTGAGTTGTTTCCATTCTATAGGAATGGTACGAACGACCAGCAGCCTCCATCAACCAAAGAGAAAAATGGGAGATCACGAGCAATTACTTTTACTGTTATCCCCATTGTTGCTTCGGCGTTACTCTTCTATTTCTGTTGCTATTTGCGTCGGAAAAGAGCAAGAAAGAGTTACAATAAGACCATCCTCAAACAAAATTTTGGCCATGAAAGTAACACTATAGGGGGCTTGCAATTTGATTTGTCTATAATTGAAGCCGCAACAAATAACTTCGCAGAAGAGAACAAGATTGGCAAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTTCTGATGGAAGACATATAGCTGTAAAGAGACTTTCAAAAAGTTCTAATCAAGGTGCTGCCGAATTCAAAAATGAGGTTTTATTAATAGCCAAACTTCAACATAAGAATCTAGTGGCATTTATAGGATTCTGTCTTCAAGAGGAAGAGAAGATACTTATCTATGAATATGTTCCAAATAAGAGCTTGGATTACTTTCTATTCGATCCTCGCTCAAAGAAGAGGTTAAGCTGGTCTGAACGTTACAATATTATAGATGGAATTGCTCGTGGAATTCTTTATTTACATGAGTATTCTCGTCTCAAAGTTATTCATCGTGATCTTAAACCTAGTAATATATTATTAGATGAAAATATGAATCCTAAAATTTCAGACTTTGGTCTTGCTCGAATCGTAGATCAACAACAAGGATATGCAACTAGAGTTGTTGGAACATTGTAA 2202 0.4051 MAFNLNSLKLVLVFITIFPITKAKELDYQGPVCSEDRTTSNTTYQLNLFTLFSSLSSKATTTIFYNNTIMADKDSSNAVYGLFMCRGDAPFDVCGDCVQSATHVLSSECTLSLWGMIWYEQCMVRYSNTSFFSVPSTQPSNLMSNNFNVSTNQTMFVSLLVTTMNKTADEAAFSLNKYATKEQKVTEVQTIFNLAQCTKDLSVQDCRTCLGFAVAQIPVCCKGRRGGRVLLPSCNIRFELYPFYRHGSPELFVPATKYPSIDSKYSQDPVYLSHKCLTTNYQTTLDKKRITTLLAYLSSKARNSNNKDDFQMTNVDNKVFGLYLCRGDIPSSLCAECIVNATDRIASECPMSIEAMIWYNYCLLRYSNYSFFRTMSTSPRFESMNVTKYEDYKSYYKYQLWSALTKVAGDIWDRNDRYCKETFVLNEVQRLYVQGQCTKDLSTGDCNYCIHDVIENAIPWSRLGSVGGRVLYPSCTLRFELFPFYRNGTNDQQPPSTKEKNGRSRAITFTVIPIVASALLFYFCCYLRRKRARKSYNKTILKQNFGHESNTIGGLQFDLSIIEAATNNFAEENKIGKGGFGQVYKGVLSDGRHIAVKRLSKSSNQGAAEFKNEVLLIAKLQHKNLVAFIGFCLQEEEKILIYEYVPNKSLDYFLFDPRSKKRLSWSERYNIIDGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVDQQQGYATRVVGTL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151178g00010 733 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12 247 - -
Stsc151178g00010 733 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 645 733 - -
Stsc151178g00010 733 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Stsc151178g00010 733 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Stsc151178g00010 733 Pfam Salt stress response/antifungal 287 369 IPR002902 -
Stsc151178g00010 733 Pfam Salt stress response/antifungal 393 480 IPR002902 -
Stsc151178g00010 733 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
Stsc151178g00010 733 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Stsc151178g00010 733 ProSiteProfiles Gnk2-homologous domain profile. 267 371 IPR002902 -
Stsc151178g00010 733 FunFam Cysteine-rich receptor-like protein kinase 25 139 243 - -
Stsc151178g00010 733 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Stsc151178g00010 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Stsc151178g00010 733 Pfam Protein kinase domain 570 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00010 733 SMART serkin_6 569 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00010 733 Gene3D Phosphorylase Kinase; domain 1 528 644 - -
Stsc151178g00010 733 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 528 644 - -
Stsc151178g00010 733 PIRSF SRK 2 73 IPR024171 GO:0004674
Stsc151178g00010 733 PIRSF SRK 478 733 IPR024171 GO:0004674
Stsc151178g00010 733 ProSiteProfiles Gnk2-homologous domain profile. 377 484 IPR002902 -
Stsc151178g00010 733 ProSiteProfiles Protein kinase domain profile. 569 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00010 733 Gene3D - 269 371 IPR038408 -
Stsc151178g00010 733 Gene3D - 378 484 IPR038408 -
Stsc151178g00010 733 Gene3D - 139 243 IPR038408 -
Stsc151178g00010 733 Gene3D - 27 131 IPR038408 -
Stsc151178g00010 733 SUPERFAMILY Protein kinase-like (PK-like) 551 732 IPR011009 -
Stsc151178g00010 733 Gene3D Transferase(Phosphotransferase) domain 1 645 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151178g00010 Stsc-Chr151178 53982 56732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151178g00010 266 732 Receptor kinase-like Gene Family AT4G05200 43.058 2.48e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151178g00010 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151178g00010 - - ahf:112797275 1171.76