Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151178g00007 ATGGCAGACAAAGATTCTTCTAATGCAGTCTATGGACTATTCATGTGCAGGGGTGATGTTCCCTTTGATGTTTGTGGAGATTGTGTTCAATCTGCAACACATGTTCTCTCTTCAGAGTGCACCTTGTCCATTTGGGGTATGATCTGGTATGAACAATGCATGGTTCGATATTCCAACACTTCTTTCTTCTCTGTTCCTTCAACACAGCCTTCCAATCCCATGTCCAACAACTTCAATGTTTCCACCAATCAAACAATGTTTGACTCTTTGCTTCTCAACACCATGAACAAAACTGCAGATGAAGCTGCCTTCTCTCTCAACAAATATGCCACAAAAGAACAAAAGTTAACAGAGCTTCTAACTATCTTTAATCTCGCCCAGTGCACCCGAGATCTCTCCTTCGAATCTTGTAGAACATGTCTTGGATTCGCCGTAGCGCAGATCCCGGTATGCTGTAAAGGAAGACGAGGAGGCAGAGTATTGCTCCCAAGCTGTAACATTAGGTTTGAATTATATCCTTTCTATCGCCACGGATCACCTGAACCGCTTGTTCCGGCTACGAAGTATCAAAATATTGACTCAAAATATTCACAAGATCCGGGGTATCTATCTCACGAGTGTTCAAGAACTAATTATCAAACAACACTTGACAAAAATAGAATCACCAACATCCTCAATTACTTGTCTTCCAAGGCAAGAAACTCAAACAACAACAACGAGTTCGAGATGACAAACGTTGACAACAGAGTATTCGGGCTCTACTTGTGCCGCGGTGACATCCCTTCCTCACTCTGTGCTGAATGCATCGTGAACGCCACGGATCGAATAGCCTCGGAGTGTCCAATGTCCATAGAAGCGATGATCTGGTACAACTATTGCTTACTTCGCTACTCGAACTACTCTTTCTTCAGAACAATGAGCACTAGTCCGAGATTCGAGTCGATGAATGTGACGAATAATTACCAAGATTACAGAAGCTACTACAAGTACCAATTGTGGAGTGCATTGACGAAGGTGGCAGGAGATATTTGGGACAGGAATGATAGATATTGTACGGAAACGTTTGTGTTGAACCATGTCCAAACGCTGTATGTGCAAGGGCAATGCACCAAAGATTTGTCAACCGGAGATTGTAATTACTGCATACATGATGTGATTGAAACTGCGATTCCATGGTCTCGTTTGGGAAGCGTAGGTGGAAGAGTTTTGTATCCAAGCTGCACTTTGAGGTTTGAGTTGTTTCCATTCTATAGGAATGGTACGGACGACCAGCAGCCTCCATCAATTACAGGGGAAAATGGCCGATCACGAACAATTATCTTGATTGTGGTTATCCCCATTGTTGCTTCGTTGTTACTTTTCTCTTTTTGTTGCTATTTGCTTCGAAAAAGAGCAAGAAAGAGTTACAATAAGATCATCCTCAAACAAAACTTTGGTCATGAAAGTAACACTATAGGGGGCTTGCAATTCGATTTCTCTGTAATTGAAGCTGCAACAAATAACTTTTCAGAAGAGAACAAGGTTGGCAAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTTCTGATGGAAGGCATATAGCTGTAAAGAGACTTTCAAAAAGTTCTACCCAAGGAGCAGCTGAATTCAAAAATGAAGTTTTATTAATAGCCAAACTTCAACATAAAAATCTAGTGGCATTTATAGGGTTTTGTCTTCAAGAGGAAGAGAAGATACTTATCTATGAATATGTTCCAAATAAGAGCTTGGACTACTTTTTGTTTGATCCTCATTCGGAGAAGTTGTTAAGTTGGACTGAACGCTACAATATTATAGACGGAATTGCTCGAGGAATTCTTTACTTACATGAATATTCTCGTCTTAAAGTTATTCATCGTGATCTAAAACCCAGTAATATATTATTAGATGAAAATATGAATCCTAAAATTTCAGATTTTGGTCTTGCTCGAATTGTTGATCAACAACAAGGATCTACGTCCAGAATCGTCGGAACATTGGGTTATATGTCTCCTGAATATGCAATGCAAGGAAAATTTTCTGAAAAATCTGATATTTTCAGTTTTGGAGTCATGATACTCGAAATTATCACAGGAAAAAAGAATGTAGGTTCCAGTGAATCATTTCGAAATGGAGAGGGTCTTCTAAGCTTAGTATGGAGACAATTTTGCAATGAAGCACTATTAAGTGTATTGGATCCAAAAATGAAGGGAAATTGTGCTGAATTTGAAGTGATAAGATGCATTCAGATTGGTTTATTGTGTGTTCAAGAAAATCCAGATGAAAGACCAACAATAGAGGCAATAGTGTCATATCTTAGTAATATCTCAATTGAATTACCTTCTCCACAAGAACCAGCATTTTTCTTGCATGCTAAAATGGATCCAACAAAAACATTTGCTGGCGAATCATCAAGTTCTATCTCTGTTAATGAGATATCTGAAAGTACTTTTCTTCCTCGATAG 2463 0.3918 MADKDSSNAVYGLFMCRGDVPFDVCGDCVQSATHVLSSECTLSIWGMIWYEQCMVRYSNTSFFSVPSTQPSNPMSNNFNVSTNQTMFDSLLLNTMNKTADEAAFSLNKYATKEQKLTELLTIFNLAQCTRDLSFESCRTCLGFAVAQIPVCCKGRRGGRVLLPSCNIRFELYPFYRHGSPEPLVPATKYQNIDSKYSQDPGYLSHECSRTNYQTTLDKNRITNILNYLSSKARNSNNNNEFEMTNVDNRVFGLYLCRGDIPSSLCAECIVNATDRIASECPMSIEAMIWYNYCLLRYSNYSFFRTMSTSPRFESMNVTNNYQDYRSYYKYQLWSALTKVAGDIWDRNDRYCTETFVLNHVQTLYVQGQCTKDLSTGDCNYCIHDVIETAIPWSRLGSVGGRVLYPSCTLRFELFPFYRNGTDDQQPPSITGENGRSRTIILIVVIPIVASLLLFSFCCYLLRKRARKSYNKIILKQNFGHESNTIGGLQFDFSVIEAATNNFSEENKVGKGGFGQVYKGVLSDGRHIAVKRLSKSSTQGAAEFKNEVLLIAKLQHKNLVAFIGFCLQEEEKILIYEYVPNKSLDYFLFDPHSEKLLSWTERYNIIDGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVDQQQGSTSRIVGTLGYMSPEYAMQGKFSEKSDIFSFGVMILEIITGKKNVGSSESFRNGEGLLSLVWRQFCNEALLSVLDPKMKGNCAEFEVIRCIQIGLLCVQENPDERPTIEAIVSYLSNISIELPSPQEPAFFLHAKMDPTKTFAGESSSSISVNEISESTFLPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151178g00007 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Stsc151178g00007 820 ProSiteProfiles Gnk2-homologous domain profile. 1 62 IPR002902 -
Stsc151178g00007 820 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Stsc151178g00007 820 ProSiteProfiles Gnk2-homologous domain profile. 68 174 IPR002902 -
Stsc151178g00007 820 FunFam cysteine-rich receptor-like protein kinase 10 578 779 - -
Stsc151178g00007 820 Gene3D - 71 174 IPR038408 -
Stsc151178g00007 820 Gene3D - 1 62 IPR038408 -
Stsc151178g00007 820 Gene3D - 310 416 IPR038408 -
Stsc151178g00007 820 Gene3D - 200 302 IPR038408 -
Stsc151178g00007 820 FunFam Cysteine-rich receptor-like protein kinase 25 70 174 - -
Stsc151178g00007 820 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 462 577 - -
Stsc151178g00007 820 CDD STKc_IRAK 508 775 - -
Stsc151178g00007 820 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
Stsc151178g00007 820 SMART serkin_6 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00007 820 ProSiteProfiles Gnk2-homologous domain profile. 308 416 IPR002902 -
Stsc151178g00007 820 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 212 815 - -
Stsc151178g00007 820 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Stsc151178g00007 820 Pfam Salt stress response/antifungal 6 59 IPR002902 -
Stsc151178g00007 820 Pfam Salt stress response/antifungal 320 412 IPR002902 -
Stsc151178g00007 820 Pfam Salt stress response/antifungal 82 172 IPR002902 -
Stsc151178g00007 820 Pfam Salt stress response/antifungal 211 300 IPR002902 -
Stsc151178g00007 820 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00007 820 Pfam Protein kinase domain 503 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151178g00007 820 SUPERFAMILY Protein kinase-like (PK-like) 486 797 IPR011009 -
Stsc151178g00007 820 ProSiteProfiles Gnk2-homologous domain profile. 199 302 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151178g00007 Stsc-Chr151178 41073 44984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151178g00007 197 820 Receptor kinase-like Gene Family AT4G05200 43.891 4.04e-175 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151178g00007 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151178g00007 - - ahf:112797275 1161.75