Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151175g00004 ATGGGAGAAACACACCCCCACCGTCCAACATCGTCAAGACTTGGGATGAGAGCCGTGGCCGGAGGAGGAGGAGGAGAAATTGTGGAGGTCCAAGGAGGCCACATTGTGCGGTCCACTGGCCGGAAGGACCGACACAGCAAGGTCTGCACAGCCAAGGGCCCGAGGGACCGCCGTGTGCGACTCTCCGCACACACCGCCATCCAGTTCTACGACGTCCAGGACCGACTCGGCTACGACCGCCCAAGCAAGGCCGTCGACTGGCTCATCAAGAAGGCAAAGGCAGCCATCGACGAGCTCGCCGAGCTCCCCGCATGGAAACCAACTGCCACTACCACCACCGTCACCACCACCGCCGCCGCCACGAACTCAAACGTTGCTGTTCAACAGCAGAAGCTCCGGGAGGAGGAGGAAAATCACCAGCTGAACCAAATCGTCCACCGCCAGCCGACCCCGGTGGACGACTCCATGGTAGCTTCTGGTAGCCGAAAGGCTACCGCACTGGTTGGTGGCAGTGGAAGAATCTCGGAATTTCAACTGCAACATTTGAACGACGATGACGGTAAATACAACAGTGGCGGTTCTGCTTTCCTTCCGCCGACTTTGGACACCGACATCGCTGATACCATTAAGTCCTTCTTTCCGATGGTTGGGACGGCAGAGGTTGCAACAACGACGTCGTCGTTGTCGTCATTTCATAACTATCCTCCTCCTCCGGATTTGCTTTCGCGTACGACTAGCGGTGCCAGCAACCACAATCACCACCACCACCACCACCACCACCATCATCATCAGCAGCAAGATCTGCGGCTCTCGCTGCAGTCTTTCCAGGACCCATCGATTCTTCTTCAGCAACACCATCAGCAGCAGCCGCCGCCACCACACCAGCAGCATGTTCACGAGCAAGTGCTCTTCGCGGGAACCACCGCGCTAGGGTTCGACGGCGGTTCTTCCGCATGGTCTGAACAACAGCACCACCAAGAGGAACAGGAGCATGGAAGGTTGCAGAGAGTGGTGGCATGGAATAATGCTGCTGCAGATGCTGGTAGCATTGGCCATGGCAGTGGATTCATCTTCAACTCGCCGGCGACGGCGGCGGTGCCGTCTCCTGTGATGTTTGGCCATGGCCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGTTTCGTGCTTGGATAGATCCTTCTTCGATCGCCACGGCTGCCGTGTCAGTGGATCACCACCACTACCTTTCACCGTCCGCGATCCATCAAGCTTCTATTGGGTTTGCCGGTTCTTCCTCCGGCAACTTCTCCGGCTTTCGCATACCAGCACGAATTCAGGGTGCGGAGGAGCACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1398 0.5751 MGETHPHRPTSSRLGMRAVAGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWKPTATTTTVTTTAAATNSNVAVQQQKLREEEENHQLNQIVHRQPTPVDDSMVASGSRKATALVGGSGRISEFQLQHLNDDDGKYNSGGSAFLPPTLDTDIADTIKSFFPMVGTAEVATTTSSLSSFHNYPPPPDLLSRTTSGASNHNHHHHHHHHHHHQQQDLRLSLQSFQDPSILLQQHHQQQPPPPHQQHVHEQVLFAGTTALGFDGGSSAWSEQQHHQEEQEHGRLQRVVAWNNAAADAGSIGHGSGFIFNSPATAAVPSPVMFGHGQFFSQRGPLQSSNTPSFRAWIDPSSIATAAVSVDHHHYLSPSAIHQASIGFAGSSSGNFSGFRIPARIQGAEEHDGVSDKPSSASSDSRH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 225 248 - -
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 225 269 - -
Stsc151175g00004 465 Pfam TCP family transcription factor 40 139 IPR017887 -
Stsc151175g00004 465 Coils Coil 118 138 - -
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 249 265 - -
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 1 23 - -
Stsc151175g00004 465 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 386 IPR005333 GO:0003700
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 28 47 - -
Stsc151175g00004 465 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
Stsc151175g00004 465 MobiDBLite consensus disorder prediction 443 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151175g00004 Stsc-Chr151175 24961 27505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151175g00004 5 465 TCP Transcription Factor Family AT3G15030 45.684 2.03e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc151175g00004 TCP 3.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151175g00004 - - aip:107630075 701.819