Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151169g00005 ATGACAGACATTGACACCAAGCTCGGCTGGTGGTACAAGGGATGCAAAGAGTGCTTTCAGGGTCTAGAGACACTATCAGACCAATTCTATTGTGCAAAATGTGATGAATACTATAACCATTTTCATGCCAGGTACTGCCTTCGACTGCGTGTTGCTGATGCATCTGGAAACGCTTCATTTGTTATATTTGAGAGTGCCTGCTCAAGTTTCCTTGGGATTTCTGCAAATGAGTTAGTCACAAACCTCACAATGAGCATGATGACTGCCTGGCCCTATGGCTGGAATGAGCTCATTCAGTCGGTTATTATAGCCAACCCGACCGATCCAGAATATATCCCGGATCACTATCGGACGCACTTCCCCGAGGACAACCTATCCAATGCCCTGAACGTCTACGTTCTTTCTCATTCACATATAAATATAACTGGGGGTTTCAATCTTTCTTCATATACCCTTATCCCTCCATAA 468 0.4444 MTDIDTKLGWWYKGCKECFQGLETLSDQFYCAKCDEYYNHFHARYCLRLRVADASGNASFVIFESACSSFLGISANELVTNLTMSMMTAWPYGWNELIQSVIIANPTDPEYIPDHYRTHFPEDNLSNALNVYVLSHSHINITGGFNLSSYTLIPP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151169g00005 155 Gene3D - 1 116 IPR012340 -
Stsc151169g00005 155 SUPERFAMILY Nucleic acid-binding proteins 3 80 IPR012340 -
Stsc151169g00005 155 Pfam Replication factor-A C terminal domain 10 80 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151169g00005 Stsc-Chr151169 10013 11929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151169g00005 11 78 Core DNA Replication Machinery Family AT5G61000 33.333 2.44e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151169g00005 - K07466 ahf:112778245 103.219