Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151167g00013 ATGGTCATGGATACCTTTATGAATACCACCCGGGTCTTACCCGAACCCGACATTTACTTATACACTTCTGTCTCAACACCCATTCCAGTCCATGCTAGCATCTTGGTTTCAGCATCTCCGGTTCTAGAGAACATGGTAATGTCCCACAAAATCATCAAAATCTCCGGTGTTCCATACCGCGCTGTCATCGCATTCCTACGCTTTCTCTACTCCTTCAGGTGTACGGAGGAAGAGATGGAGAAGTACGGAATGCACCTTCTAGTGCTATCGCACGTGTACATGGTGGCGGAGCTGAAGAGAAGGTGCGCGAAGCAAGTGGGAGAGCACGTGACGGAGGAGAGCGTAGTGGACGTGTTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGTGTGAAGTTGCTTGACGAAAGGTTCATGAAGGTGGAGAGAACAGAGGGATGGCAATTCTTGCAACACCATGACCCACAGCTTGAGCTTGATATCCTCTCCCTTCTTGATCAAAATGACAACAGAAAGAAGAGATTGATGAAGAGGAAGAAACAAGAGAAGGTGTATATGCAACTGAGCGAAGCAATGGAGTGTATAGAACATATTTGTACGGAAGGGTGCACCAATGTGGGGCCTTATGATGTGGAACTTCGAAAAGGTAGAGAACCATGCACAAAGTTTGGTGACACGTGTCAGGGGATGCAGGCTTTGATACAACACTTTGCCACGTGTACGATGAGGAATAGCGGAGGGTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGACTTCACTCCTCCGTTTGCCACCACCATGATTCCTGCAAGGTCCCTCTTTGCAGGTAA 846 0.4882 MVMDTFMNTTRVLPEPDIYLYTSVSTPIPVHASILVSASPVLENMVMSHKIIKISGVPYRAVIAFLRFLYSFRCTEEEMEKYGMHLLVLSHVYMVAELKRRCAKQVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKLLDERFMKVERTEGWQFLQHHDPQLELDILSLLDQNDNRKKRLMKRKKQEKVYMQLSEAMECIEHICTEGCTNVGPYDVELRKGREPCTKFGDTCQGMQALIQHFATCTMRNSGGCMRCKRMWQLFRLHSSVCHHHDSCKVPLCR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151167g00013 281 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 14 281 IPR044513 -
Stsc151167g00013 281 Pfam BTB/POZ domain 17 105 IPR000210 GO:0005515
Stsc151167g00013 281 Pfam TAZ zinc finger 193 280 IPR000197 -
Stsc151167g00013 281 Gene3D TAZ domain 183 281 IPR035898 -
Stsc151167g00013 281 FunFam BTB/POZ and TAZ domain-containing protein 2 111 181 - -
Stsc151167g00013 281 ProSiteProfiles BTB domain profile. 16 78 IPR000210 GO:0005515
Stsc151167g00013 281 SMART BTB_4 16 110 IPR000210 GO:0005515
Stsc151167g00013 281 SUPERFAMILY POZ domain 26 135 IPR011333 -
Stsc151167g00013 281 Gene3D Potassium Channel Kv1.1; Chain A 14 108 IPR011333 -
Stsc151167g00013 281 SUPERFAMILY TAZ domain 184 281 IPR035898 -
Stsc151167g00013 281 Gene3D - 109 182 - -
Stsc151167g00013 281 SMART TAZ_2 186 281 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151167g00013 Stsc-Chr151167 90644 92967 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc151167g00013 BTB 4.9e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151167g00013 - - qsu:112013900 375.941