Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151167g00012 ATGGAGAAGTACGGAATGCACCTTCTAGTGCTATCGCACGTGTACATGGTGGCGGAGCTGAAGAGAAGGTGCGCGAAGCAAGTGGGAGAGCACGTGACGGAGGAGAGCGTAGTGGACGTGTTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGTGTGAAGTTGCTTGACGAAAGGTTCATGAAGGTGGAGAGAACAGAGGGATGGCAATTCTTGCAACACCATGACCCACAGCTTGAGCTTGATATCCTCTCCCTTCTTGATCAAAATGACAACAGAAAGAAGAGATTGATGAAGAGGAAGAAACAAGAGAAGGTGTATATGCAACTGAGCGAAGCAATGGAGTGTATAGAACATATTTGTACGGAAGGGTGCACCAATGTGGGGCCTTATGATGTGGAACTTCGAAAAGGTAGAGAACCATGCACAAAGTTTGGTGACACGTGTCAGGGGATGCAGGCTTTGATACAACACTTTGCCACGTGTACGATGAGGAATAGCGGAGGGTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGACTTCACTCCTCCGTTTGCCACCACCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTGAATTGAAGAGGCAACAAGAGAAGAAGAAAGATGATGGAAGATGGAGACTTCTTGTGAGGAAGGTGGCTTCAGCCAAAGCCATGTCATCTTTGTTTCTCTCAAACACCAACTGTGAGATCAACAAATTTTAG 747 0.4779 MEKYGMHLLVLSHVYMVAELKRRCAKQVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKLLDERFMKVERTEGWQFLQHHDPQLELDILSLLDQNDNRKKRLMKRKKQEKVYMQLSEAMECIEHICTEGCTNVGPYDVELRKGREPCTKFGDTCQGMQALIQHFATCTMRNSGGCMRCKRMWQLFRLHSSVCHHHDSCKVPLCRQIELKRQQEKKKDDGRWRLLVRKVASAKAMSSLFLSNTNCEINKF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151167g00012 248 SMART TAZ_2 108 203 IPR000197 -
Stsc151167g00012 248 Pfam TAZ zinc finger 115 202 IPR000197 -
Stsc151167g00012 248 SUPERFAMILY TAZ domain 106 205 IPR035898 -
Stsc151167g00012 248 FunFam BTB/POZ and TAZ domain-containing protein 2 103 231 - -
Stsc151167g00012 248 Gene3D Potassium Channel Kv1.1; Chain A 1 72 IPR011333 -
Stsc151167g00012 248 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 239 IPR044513 -
Stsc151167g00012 248 Gene3D TAZ domain 102 238 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151167g00012 Stsc-Chr151167 88722 92382 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc151167g00012 zf-TAZ 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151167g00012 - - zju:107418254 338.961