Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151167g00011 ATGGTCATGGATACCTTTATGAATACCACCCGGGTCTTACCCGAACCCGACATTTACTTATACACTTCTGTCTCAACACCCATTCCAGTCCATGCTAGCATCTTGGTTTCAGCATCTCCGGTTCTAGAGAACATGGTAATGTCCCACAAAATCATCAAAATCTCCGGTGTTCCATACCGCGCTGTCATCGCATTCCTACGCTTTCTCTACTCCTTCAGGTGTACGGAGGAAGAGATGGAGAAGTACGGAATGCACCTTCTAGTGCTATCGCACGTGTACATGGTGGCGGAGCTGAAGAGAAGGTGCGCGAAGCAAGTGGGAGAGCACGTGACGGAGGAGAGCGTAGTGGACGTGTTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGTGTGAAGTTGCTTGACGAAAGGTTCATGAAGGTGGAGAGAACAGAGGGATGGCAATTCTTGCAACACCATGACCCACAGCTTGAGCTTGATATCCTCTCCCTTCTTGATCAAAATGACAACAGAAAGAAGAGATTGATGAAGAGGAAGAAACAAGAGAAGGTGTATATGCAACTGAGCGAAGCAATGGAGTGTATAGAACATATTTGTACGGAAGGGTGCACCAATGTGGGGCCTTATGATGTGGAACTTCGAAAAGGTAGAGAACCATGCACAAAGTTTGGTGACACGTGTCAGGGGATGCAGGCTTTGATACAACACTTTGCCACGTGTACGATGAGGAATAGCGGAGGGTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGACTTCACTCCTCCGTTTGCCACCACCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTGAATTGAAGAGGCAACAAGAGAAGAAGAAAGATGATGGAAGATGGAGACTTCTTGTGAGGAAGGTGGCTTCAGCCAAAGCCATGTCATCTTTGTTTCTCTCAAACACCAACTGTGAGATCAACAAATTTTAG 981 0.476 MVMDTFMNTTRVLPEPDIYLYTSVSTPIPVHASILVSASPVLENMVMSHKIIKISGVPYRAVIAFLRFLYSFRCTEEEMEKYGMHLLVLSHVYMVAELKRRCAKQVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKLLDERFMKVERTEGWQFLQHHDPQLELDILSLLDQNDNRKKRLMKRKKQEKVYMQLSEAMECIEHICTEGCTNVGPYDVELRKGREPCTKFGDTCQGMQALIQHFATCTMRNSGGCMRCKRMWQLFRLHSSVCHHHDSCKVPLCRQIELKRQQEKKKDDGRWRLLVRKVASAKAMSSLFLSNTNCEINKF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151167g00011 326 Gene3D - 109 181 - -
Stsc151167g00011 326 SUPERFAMILY POZ domain 26 134 IPR011333 -
Stsc151167g00011 326 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 14 317 IPR044513 -
Stsc151167g00011 326 FunFam BTB/POZ and TAZ domain-containing protein 2 111 181 - -
Stsc151167g00011 326 SUPERFAMILY TAZ domain 184 283 IPR035898 -
Stsc151167g00011 326 ProSiteProfiles BTB domain profile. 16 78 IPR000210 GO:0005515
Stsc151167g00011 326 Gene3D TAZ domain 182 309 IPR035898 -
Stsc151167g00011 326 SMART BTB_4 16 110 IPR000210 GO:0005515
Stsc151167g00011 326 Gene3D Potassium Channel Kv1.1; Chain A 15 107 IPR011333 -
Stsc151167g00011 326 Pfam BTB/POZ domain 17 105 IPR000210 GO:0005515
Stsc151167g00011 326 FunFam BTB/POZ and TAZ domain-containing protein 2 181 309 - -
Stsc151167g00011 326 SMART TAZ_2 186 281 IPR000197 -
Stsc151167g00011 326 Pfam TAZ zinc finger 193 280 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151167g00011 Stsc-Chr151167 88722 92967 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc151167g00011 BTB 7.2e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151167g00011 - - qsu:112013900 423.705