Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151167g00008 ATGCTCTTACGTGGCATCATCTCGAGCCCTCTCCCTTCTCTCCGCCTTCGACTCAAACCCAAACCCGAAACCCGAAACGTCGTCGTCTCGTCGCAAACCCCAACGAACACCAAACCCTACCCTCTCTCCATCTCCGACGAGGCTCTCGAATCTCGCGGCTTCGTCCTCCGCCGGAGCGCCGACGGCCTCAACCTCGACGACCTCAACGGCGTCTTCGTGGCCGTCGGGTTCCCGAAGCGAGATCCGGAGAAGATCCGCGTGGCGCTGGAGAACACGGAGTCGCTGCTGTGGGTGGAGTACCTCCGTACACGGCGGCCGGTGGCGTTTGCAAGAGCAACCGGCGACGGCGTGTTCAACGCGATAATTTGGGACGTTGTGGTGGATCCATCGTTCCAAGGGGTTGGGCTTGGGAAAGCGGTTATGGAGAGAATGATATCGGAGCTTCTAGAAAAAGGAATCGTGAACATTGCTCTTTACTCGGAGCCTAGGGTTCTTGGATTCTATCGCCCTCTAGGGTTTGTTGCTGATCCTGATGGAATTCGAGGAATGGTTTTTTCCAGAAAGAACAAGAAGAACAAGAACAAATAG 588 0.5578 MLLRGIISSPLPSLRLRLKPKPETRNVVVSSQTPTNTKPYPLSISDEALESRGFVLRRSADGLNLDDLNGVFVAVGFPKRDPEKIRVALENTESLLWVEYLRTRRPVAFARATGDGVFNAIIWDVVVDPSFQGVGLGKAVMERMISELLEKGIVNIALYSEPRVLGFYRPLGFVADPDGIRGMVFSRKNKKNKNK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151167g00008 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 55 191 IPR000182 GO:0016747
Stsc151167g00008 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 64 177 IPR016181 -
Stsc151167g00008 195 Gene3D - 58 187 - -
Stsc151167g00008 195 CDD NAT_SF 105 159 - -
Stsc151167g00008 195 PANTHER ACYL-COA N-ACYLTRANSFERASE 26 191 IPR045039 GO:0008080
Stsc151167g00008 195 Pfam Acetyltransferase (GNAT) family 86 173 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151167g00008 Stsc-Chr151167 76458 77165 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc151167g00008 Acetyltransf_1 4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151167g00008 K22450 - jre:108989416 290.426