Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc151164g00008 | ATGGAAACTGCACCCGCTTGCTTCTTCTGCGTTGGAATCCCAGCAACTGCAACTGCCACAGCCACAGCAACTCCGAATTCCGTGCCTTTCCGTTGTGCCGTTAGAATCCCCTTCTCTTCTTCATTTGCCTCGCTCTGCCTTTTAGCTCGTACCAGACACGGCGGCGCCGGCGCCGGCGCATCTGTTCTCCGAACTTTGTGCTTGTCGTCGGTGTCATCTTCTTCTTCTTCTTCGTCGGTCACCGGCCTCAGCCTAATTCGAAGCGCCGCGAACAGTGAAACGAAGCTTCCGGTTCCAAGTAAGGCCAAGAGAAGTAGAAGAAGAACGCGAACGGGCTCTCCTCCTACTCCTCGGCCTCTTACTCCGGAGAAAACTAACAGTAACGGTAACGGTGATGGTAACAGCAATGAGAATGGTGACCCTCTAGGGTGGAAGGATCTCGGAAAGAGCGTGGTGAGATGGATTCGGGAGGGCATGAGGGCGATGGCGTCGGATTTCGCGGCGGCGGAGTTGCAGGGAGAAGCGGAATTCTCTGAGCTGATGCAGCGTATGGGGCCTGGACTCACTTTTGTGATCGAGGCTCAGCCTTATTTGAACGCTGTTCCGATGCCACTTGGTCTTGAAGTGATGTGCTTCAAGGCCTGCACACACTACCCAACTCTCTTTGATCACTTCCAGAGGGAGCTCCGTGAGGTTCTCCAGGACCTTCAGAATAAGTCCATGGTCGAAGACTGGCGCCAAACGCAGTCTTGGAAGCTGCTTAAAACTCTCGCCAATTCAGCTCAGCATCGGGCAGTGGCCAGAAAGATAGCCAATCCCCAACCCAAGAATGTCCAAGGCGACAACGTGAAAGCAATGCAGCAGAGGATCGAGGATTTCACCAACCGCATGTCTGAACTACTCCGTATTGAAAGGGATGCTGAATTAGAGTTCACTCAGGAGGAATTGGATGCTGTTCCTAGGCCACTGGATGATGCTTCCGATCCCTCAAGACCGACTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAACTTAACTGCCATCAGTACCTCTACTGGACTTGGAGGAATGCATTTGGTGTTGTTCAAGGTTGAAGGTAACCATAGATTACCACCTACTACTCTTTCACCTGGAGATATGGTTTGTGTCAGAACATGTGACAGCAGGGGTGCAGTTACAACTTCTTGCATACAAGGATTTGTGAATAATCTCGGGGATGATGGCTGCAGTATTAGTGTTGCTTTAGAGTCACGCCATGGCGATCCTACATTCTCCAAACTCTTCGGAAAGAGTGTGCGCATAGACCGTATTCAAGGACTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCTCTAATGCTGCTTCAGAAGAATGGTTTGAGAAAGAAGAATCCTTCAATTGCTGTAGTATCTACACTCTTTGGAGAAAAGGAAGATGTTGCATGGCTTGAGAAGAACAATTTTGTTGACTGGGAAGAAGAAGAATTAAATGGACTGTTAGAAAATGAAACATTTGATAGTTCTCAGCAGAGAGCAATTGCATTGGGTTTGAATAAGAAGAGGCCTGTATTGGTTATCCAAGGGCCTCCAGGTACAGGCAAGACTGGTTTGCTCAAGCAACTTATAGTATGTGCCGTTCAACAAGGTGAAAGGGTTCTAGTGACAGCACCTACGAATGCAGCTGTTGACAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTGCGAGTTGGAAATCCTGCTCGTATTTCAAAAGCTGTGGGATCAAAGTCATTGGATGCAATTGTAAATGCGAAGCTTGCAAGTTTTCGAGAGGAGTATGAAAGGAAGAAGTCAAATCTGAGGAAGGATCTACGACTTTGTTTAAAGGATGATTCACTAGCTGCGGGAATACGCCAACTTCTGAAGCAGCTGGGAAGGTCCCTCAAGAAAAAAGAAAAGCAGACTATGAATGAAGTTTTATCTAGTGCGCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGATCCCTTAATTCGAAGGCTAGATACTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCATCTTGCTGGATTCCTATACTGCTTGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTTATATTGTCCAGAAAGGCCTTAGAAGGTGGCCTAGGAATATCACTACTGGAGAGAGCTACAGCATTGCATGAAGGGATTCTCACCACCAGGCTAACAACACAATACCGTATGAATGATGCAATTGCTAGCTGGGCCTCGAAGGAGATGTATGGAGGATTGCTGAAGTCCTCTGAGTCTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCCACATGGATAACACAATGTCCACTGCTATTGCTCGATACAAGAATGCCATATGGAAGTCTGTCAGTTGGTTGCGAAGAGCATCTGGACCCGGCAGGAACAGGCTCATTTTATAATGAAGGAGAAGCTGATATAGTTCTGCAGCATGTCCTTTCCTTGATTTATTCTGGTGTTAACCCAGCTGCCATTGTGGTGCAGTCACCTTATGTTGCGCAAGTGCAGCTTCTGAGGGACATGCTTGCAGAGGTACCGGAAGCTGCTGGTACCGAGGTTGCAACAATTGATAGTTTTCAAGGTCGCGAAGCTGATGCAGTAATTTTATCCATGGTACGGTCAAACACACTGGGAGCTGTTGGATTTCTTGGTGATAGCAGAAGAATCAATGTTGCCATCACGAGGGCGCGCAAACATGTAGCCGTGGTCTGTGACAGCTCAACAATATGCCACAACACCTTCCTGGCGAGACTTCTGCGTCACATTCGACACTTTGGTCGGGTGAAGCATGCAGAACCAGGTAGTTTTGGGGGTTCTGGACTTGGGATGAACCCGATATTACCCTCCATTAATTAG | 2967 | 0.4762 | METAPACFFCVGIPATATATATATPNSVPFRCAVRIPFSSSFASLCLLARTRHGGAGAGASVLRTLCLSSVSSSSSSSSVTGLSLIRSAANSETKLPVPSKAKRSRRRTRTGSPPTPRPLTPEKTNSNGNGDGNSNENGDPLGWKDLGKSVVRWIREGMRAMASDFAAAELQGEAEFSELMQRMGPGLTFVIEAQPYLNAVPMPLGLEVMCFKACTHYPTLFDHFQRELREVLQDLQNKSMVEDWRQTQSWKLLKTLANSAQHRAVARKIANPQPKNVQGDNVKAMQQRIEDFTNRMSELLRIERDAELEFTQEELDAVPRPLDDASDPSRPTEFLVSHSQPQQELCDTICNLTAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSRGAVTTSCIQGFVNNLGDDGCSISVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVSTLFGEKEDVAWLEKNNFVDWEEEELNGLLENETFDSSQQRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKAVGSKSLDAIVNAKLASFREEYERKKSNLRKDLRLCLKDDSLAAGIRQLLKQLGRSLKKKEKQTMNEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILLGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATALHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSESVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVLQHVLSLIYSGVNPAAIVVQSPYVAQVQLLRDMLAEVPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGSGLGMNPILPSIN | 988 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc151164g00008 | 988 | Gene3D | - | 336 | 448 | - | - | |
| Stsc151164g00008 | 988 | CDD | SF1_C_Upf1 | 764 | 960 | IPR047187 | - | |
| Stsc151164g00008 | 988 | SMART | AAA_5 | 529 | 744 | IPR003593 | GO:0016887 | |
| Stsc151164g00008 | 988 | Gene3D | - | 762 | 970 | IPR027417 | - | |
| Stsc151164g00008 | 988 | SMART | ultradead3 | 510 | 762 | IPR014001 | - | |
| Stsc151164g00008 | 988 | FunFam | DNA helicase A | 762 | 970 | - | - | |
| Stsc151164g00008 | 988 | FunFam | DNA-binding protein SMUBP-2 isoform X2 | 316 | 448 | - | - | |
| Stsc151164g00008 | 988 | PANTHER | DNA2/NAM7 HELICASE FAMILY MEMBER | 119 | 971 | - | - | |
| Stsc151164g00008 | 988 | MobiDBLite | consensus disorder prediction | 94 | 144 | - | - | |
| Stsc151164g00008 | 988 | MobiDBLite | consensus disorder prediction | 315 | 335 | - | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc151164g00008 | - | - | aip:107625008 | 1757.65 |
Showing 1 to 1 of 1 entries