Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151162g00012 ATGTCCCCTGAATCCGTGAACGATAACGAGTACGAGTCTCCGGCGGATATATGGGCGCTAGGATGCGCCGTCGTGGAGATGTTCACCGGAAAGCCAGCGTGGAATGTGAAGAGTGGGACCAACATGTGGTCGCTGCTCATCCGGATCGGAGTGAGTGAAGAAATTCCGATCGTTCCGGAGGATTTGTCTGAACAGGGGAAGGACTTTTTGAGAAAGTGTTTCGTTAAGGATCCCAGGGAGAGGTGGACGGCGGAGATGCTACTCAACCACCCGTTTCTCGCCGGAGAAGATGATCGTGTTTTGGTCCATGACGAAAAAGTTGTGCCAAAATCGCCGAGAAGTAACTTGGACTTCTTCCCTGATTGGGATTCAACTTCAACGGTGACTGATTCAACTTCTACTACTGTTTCGTTGCCGGAGGAACGGGTACGGCGGCTGGTGGCGGAGCAGGGGCCGCCGGATTGGTCAGAATGGGAGGGCTGGACAAGTGTTAGGTGA 498 0.5341 MSPESVNDNEYESPADIWALGCAVVEMFTGKPAWNVKSGTNMWSLLIRIGVSEEIPIVPEDLSEQGKDFLRKCFVKDPRERWTAEMLLNHPFLAGEDDRVLVHDEKVVPKSPRSNLDFFPDWDSTSTVTDSTSTTVSLPEERVRRLVAEQGPPDWSEWEGWTSVR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151162g00012 165 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151162g00012 165 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 135 - -
Stsc151162g00012 165 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Stsc151162g00012 165 Pfam Protein kinase domain 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151162g00012 165 SUPERFAMILY Protein kinase-like (PK-like) 1 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151162g00012 Stsc-Chr151162 76220 76717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151162g00012 1 165 MAP Kinase Kinase Kinase AT5G67080 55.747 2.94e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc151162g00012 Pkinase 1.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151162g00012 - - aip:107641670 259.61