Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151162g00010 ATGCCGGATCATTATTCCAGTGGTCCTGCCACAATGAACGACCAGCTCTCCAACCCAACCTCCATCTTCGGTCTACGCCTCTGGGTTGTTCTTGGTGTCTGCGTTGGCGCCTCCATTGTCCTCCTCTTATTCCTTATCTCCATTTGCCTCGCTTCCAAGCGCTCCAAGAACACCAACACCACCACCACCACCATCACCACCAACAACAACAACACTTCATCTTCAATCCCCGTCCCTGATGTATCCAAGGAGATCCAAGAGATCAGAGTCATTGACCACAACCCATTACCCGACCCGCTTCCCGAACCGGAACCGGACAACAGAATCCAGTTTGAGATAGGGAAGAACCATAGAATCTCATACCCTACTGAACAACGTCCTTTCCTAAGGTCTTCTTCCCGTGAAGGCAGTGGTGAGGTTCCTACCGTGATCCCCGAGGTTTCTCACTTGGGTTGGGGCCACTGGTACACCCTCAGGGAGCTTGAGGATTCCACCAATGGCTTTGCACCGGAGAATGTCATTGGTGAAGGTGGCTATGGAATTGTTTACCATGGTGTGTTGAAGGACAACACAAATGTTGCCGTTAAGAATTTGCTCAACAACAGGGGACAAGCAGAGAGAGAGTTTAAGGTTGAAGTGGAAGCTATAGGAAGAGTTCGGCACAAGAATCTAGTGAGGTTGCTGGGTTATTGTGCTGAAGGAGCACACAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTGGAGCAGTGGCTGCATGGTGATGTTGGCTCTTGCAGCCCTCTAACTTGGGAGATTCGAATGAACATCATCCTTGGAACTGCAAAAGGGCTAACTTATCTTCACGAGGGGCTGGAGCCAAAAGTTGTTCACCGTGATATCAAATCAAGCAATATCTTGATAGATAAGCAGTGGAATTCCAAGGTTTCAGATTTTGGCCTTGCCAAACTCCTTGGCTCTCACAACAGCTATGTCACCACCCGTGTTATGGGTACATTTGGATATGTAGCTCCAGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTATATAGTTTTGGAATTCTTATCATGGAAGTAATCACAGGGAGAAACCCGGTTGATTATAGCCGTCCGCCAGAAGAGGTGAATTTAGTTGATTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGAGAGTGTTGGATCCTAAGCTTCCTGAGAAACCAACATTAAGGGCACTAAAGCGAGTCCTTCTTGTAGCTCTACGCTGCACAGACCCTAATGCACAAAAAAGGCCTAAAATGGGACATGTTATACACATGCTTGAGGCTGAAGATTCACTCAATTACAGAGAGGATCGGAGAACCAGAAGGGATGCAGATCAGTCACCTAAGCATAGAGTAAATGATGGATTAAAAGTGAATGCAAGTGTATCAGATGGTGACTGTAACAATGAAAATGGCAGGTGTGGCCATGAGACAAAGACAACAAATAGCCATCAAGTAGAAAAGCAATAA 1509 0.4626 MPDHYSSGPATMNDQLSNPTSIFGLRLWVVLGVCVGASIVLLLFLISICLASKRSKNTNTTTTTITTNNNNTSSSIPVPDVSKEIQEIRVIDHNPLPDPLPEPEPDNRIQFEIGKNHRISYPTEQRPFLRSSSREGSGEVPTVIPEVSHLGWGHWYTLRELEDSTNGFAPENVIGEGGYGIVYHGVLKDNTNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGSCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSHNSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPERVLDPKLPEKPTLRALKRVLLVALRCTDPNAQKRPKMGHVIHMLEAEDSLNYREDRRTRRDADQSPKHRVNDGLKVNASVSDGDCNNENGRCGHETKTTNSHQVEKQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151162g00010 502 PANTHER OS01G0323000 PROTEIN 11 459 - -
Stsc151162g00010 502 MobiDBLite consensus disorder prediction 59 78 - -
Stsc151162g00010 502 CDD STKc_IRAK 174 440 - -
Stsc151162g00010 502 SMART serkin_6 168 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151162g00010 502 Coils Coil 188 208 - -
Stsc151162g00010 502 MobiDBLite consensus disorder prediction 475 492 - -
Stsc151162g00010 502 SUPERFAMILY Protein kinase-like (PK-like) 152 440 IPR011009 -
Stsc151162g00010 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Stsc151162g00010 502 Pfam Protein kinase domain 171 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151162g00010 502 MobiDBLite consensus disorder prediction 447 502 - -
Stsc151162g00010 502 Gene3D Transferase(Phosphotransferase) domain 1 244 457 - -
Stsc151162g00010 502 FunFam Probable serine/threonine-protein kinase At1g01540 148 243 - -
Stsc151162g00010 502 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Stsc151162g00010 502 ProSiteProfiles Protein kinase domain profile. 168 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151162g00010 502 MobiDBLite consensus disorder prediction 447 465 - -
Stsc151162g00010 502 Gene3D Phosphorylase Kinase; domain 1 148 243 - -
Stsc151162g00010 502 FunFam Putative receptor-like serine/threonine-protein kinase 244 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151162g00010 Stsc-Chr151162 64600 67581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151162g00010 132 445 Trihelix Transcription Factor Family AT1G70460 45.625 1.65e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc151162g00010 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151162g00010 - - gmx:100797726 768.459