Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151160g00006 ATGGAATCTGAAGGAGCTAATAGGTTCTACTCTGTTGATGATGATGAGTTCAGATTGGATGCCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCAAGGATTGGTGAAGGGGCTCATGCCAAAGTCTATGAGGGAAAATACAAAAACCAGGCTGTTGCTATCAAAATTCTGCATAAAGGAGAGACTCCAGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTAGCTATGCTGTCTAGGGTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACCGAGCTCTTGTTGGGAGGAACATTGCGAAAGTATTTGCTTAACATGCGACCCAAATGCTTGGACATGCATTTAGCCACTGGTTTTGCGCTTGATATTGCTCGCGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGATAACTTGCTTTTAACCGAAGACCAAAAAATAGTCAAGCTAGCAGATTTCGGCTTAGCAAGAGAAGAATCATTAACTGAGATGATGACTGCAGAAACAGGAACTTACCGATGGATGGCTCCGGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTTGATGCATATAGCTTTGCAATTGTGTTGTGGGAGCTCATACACAACAAAGTTCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGTGCGGAGAATCTTCCTGAGGAATTGGCCGAAATCCTAACTTCGTGCTGGCAAGAGGATCCAAACGCCCGACCCAACTTCACCCAGATAATCCAGATGCTCCTGAATTATCTTTACACCATTGCGCCGCCAGAACCCGTGATTCCTTCAAGAATATTCACTTCTGAGAACACTGTCTTGCCGCCCGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACGGACGAAACCAAGCTTAACAGTTTTCTTTGCTGTTTCAGCCAGTGTTATTAA 1071 0.4603 MESEGANRFYSVDDDEFRLDAKWLIDPKHLYVGPRIGEGAHAKVYEGKYKNQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDMHLATGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKIVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELAEILTSCWQEDPNARPNFTQIIQMLLNYLYTIAPPEPVIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETKLNSFLCCFSQCY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151160g00006 356 FunFam serine/threonine-protein kinase HT1 111 310 - -
Stsc151160g00006 356 Gene3D Phosphorylase Kinase; domain 1 18 109 - -
Stsc151160g00006 356 PRINTS Tyrosine kinase catalytic domain signature 106 119 IPR001245 GO:0004672|GO:0006468
Stsc151160g00006 356 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Stsc151160g00006 356 PRINTS Tyrosine kinase catalytic domain signature 144 162 IPR001245 GO:0004672|GO:0006468
Stsc151160g00006 356 PRINTS Tyrosine kinase catalytic domain signature 218 240 IPR001245 GO:0004672|GO:0006468
Stsc151160g00006 356 MobiDBLite consensus disorder prediction 325 339 - -
Stsc151160g00006 356 SMART serkin_6 30 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151160g00006 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Stsc151160g00006 356 SUPERFAMILY Protein kinase-like (PK-like) 22 318 IPR011009 -
Stsc151160g00006 356 ProSiteProfiles Protein kinase domain profile. 30 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151160g00006 356 CDD STKc_MAP3K-like 36 290 - -
Stsc151160g00006 356 Gene3D Transferase(Phosphotransferase) domain 1 111 298 - -
Stsc151160g00006 356 Pfam Protein tyrosine and serine/threonine kinase 33 290 IPR001245 GO:0004672|GO:0006468
Stsc151160g00006 356 ProSitePatterns Protein kinases ATP-binding region signature. 36 57 IPR017441 GO:0005524
Stsc151160g00006 356 PIRSF TyrPK_CSF1-R 1 133 - -
Stsc151160g00006 356 PIRSF TyrPK_CSF1-R 120 302 - -
Stsc151160g00006 356 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 290 - -
Stsc151160g00006 356 MobiDBLite consensus disorder prediction 314 340 - -
Stsc151160g00006 356 FunFam Kinase suppressor of Ras 1 19 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151160g00006 Stsc-Chr151160 63148 65885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151160g00006 17 356 MAP Kinase Kinase Kinase AT5G50180 79.412 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc151160g00006 PK_Tyr_Ser-Thr 3.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151160g00006 - - gmx:100796593 659.448