Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151160g00002 | ATGGAATCGAATCCCGCCCGTACAATTAAGCTTCTCTGCAGCTACGGCGGCAAGATCCTTCCACGCGCCACCGACGGTGAGCTCCGTTACGTCGGCGGACACACCAGAGTCCTCACCGTCGATCGTTCCATTTCCTTCTCAGAGTTGTTGTTGAAGCTTGGAGAGTTGTGCGGTTCGTCCGTGACGTTACGGTGTCAATTGCCGAACGGAGACTTAGAAACCTTGATCTCCGTCACAAGCGACGAAGATCTGACGCACATAATCGAAGAATACGATCGCGCTTCTTCGAAACTACCTCATCCGTTGAAGATCAGAGCCGTGCTATTTCCGCCGAAATCGTCGAAGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTCGTCTCCCTCTGCTTCGTCCAGCGCCAGTCACTCTCCAGCCAGATCTCCGTACACCTCCGCGGAATCGCTGCCACATGTGGCGGCGTATCGCATCCTCCGCCATAACCGTCCTATCGCCGCAATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTGGATGGAAGCCCTAGGTTTCTTTATTACGGACCTCACTGCAGTAATTACTGCCATTGA | 600 | 0.5483 | MESNPARTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFSELLLKLGELCGSSVTLRCQLPNGDLETLISVTSDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKSSKKVSPATSSPSSSPSASSSASHSPARSPYTSAESLPHVAAYRILRHNRPIAAIRNGSAKACCYNGQLDGSPRFLYYGPHCSNYCH | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151160g00002 | 199 | SMART | PB1_new | 23 | 109 | IPR000270 | GO:0005515 | |
Stsc151160g00002 | 199 | Gene3D | - | 29 | 107 | - | - | |
Stsc151160g00002 | 199 | PANTHER | OS05G0427100 PROTEIN-RELATED | 5 | 145 | - | - | |
Stsc151160g00002 | 199 | CDD | PB1_UP2 | 12 | 109 | - | - | |
Stsc151160g00002 | 199 | MobiDBLite | consensus disorder prediction | 115 | 144 | - | - | |
Stsc151160g00002 | 199 | SUPERFAMILY | CAD & PB1 domains | 25 | 118 | - | - | |
Stsc151160g00002 | 199 | Pfam | PB1 domain | 27 | 97 | IPR000270 | GO:0005515 | |
Stsc151160g00002 | 199 | MobiDBLite | consensus disorder prediction | 113 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151160g00002 | Stsc-Chr151160 | 31215 | 33705 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151160g00002 | 9 | 116 | MAP Kinase Kinase Kinase | AT1G04700 | 47.222 | 7.22e-26 | 102 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151160g00002 | - | - | gmx:100810563 | 261.922 |