Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151160g00002 ATGGAATCGAATCCCGCCCGTACAATTAAGCTTCTCTGCAGCTACGGCGGCAAGATCCTTCCACGCGCCACCGACGGTGAGCTCCGTTACGTCGGCGGACACACCAGAGTCCTCACCGTCGATCGTTCCATTTCCTTCTCAGAGTTGTTGTTGAAGCTTGGAGAGTTGTGCGGTTCGTCCGTGACGTTACGGTGTCAATTGCCGAACGGAGACTTAGAAACCTTGATCTCCGTCACAAGCGACGAAGATCTGACGCACATAATCGAAGAATACGATCGCGCTTCTTCGAAACTACCTCATCCGTTGAAGATCAGAGCCGTGCTATTTCCGCCGAAATCGTCGAAGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTCGTCTCCCTCTGCTTCGTCCAGCGCCAGTCACTCTCCAGCCAGATCTCCGTACACCTCCGCGGAATCGCTGCCACATGTGGCGGCGTATCGCATCCTCCGCCATAACCGTCCTATCGCCGCAATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTGGATGGAAGCCCTAGGTTTCTTTATTACGGACCTCACTGCAGTAATTACTGCCATTGA 600 0.5483 MESNPARTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFSELLLKLGELCGSSVTLRCQLPNGDLETLISVTSDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKSSKKVSPATSSPSSSPSASSSASHSPARSPYTSAESLPHVAAYRILRHNRPIAAIRNGSAKACCYNGQLDGSPRFLYYGPHCSNYCH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151160g00002 199 SMART PB1_new 23 109 IPR000270 GO:0005515
Stsc151160g00002 199 Gene3D - 29 107 - -
Stsc151160g00002 199 PANTHER OS05G0427100 PROTEIN-RELATED 5 145 - -
Stsc151160g00002 199 CDD PB1_UP2 12 109 - -
Stsc151160g00002 199 MobiDBLite consensus disorder prediction 115 144 - -
Stsc151160g00002 199 SUPERFAMILY CAD & PB1 domains 25 118 - -
Stsc151160g00002 199 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Stsc151160g00002 199 MobiDBLite consensus disorder prediction 113 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151160g00002 Stsc-Chr151160 31215 33705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151160g00002 9 116 MAP Kinase Kinase Kinase AT1G04700 47.222 7.22e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151160g00002 - - gmx:100810563 261.922