Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151159g00019 ATGTCTATTTCTAAAGCTTATGAGACAACAGATAAGGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGATCAACTGCTGTGACTGCAATTCTTATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGGGCAGTACTGTCAAGGGGAGGGGAGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGAGGGGTAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGCCAGCTTGCAGTTTCCCGAGCATTTGGAGACAAAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTATGCTGATATTAACCCAAATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAACCAAGAGGCTGTAGATATTGCAAAAAGGGTAAAGGATCCACAAAGAGCTGCCAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAAGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGATAA 549 0.4317 MSISKAYETTDKAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGEAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADINPNIELLILASDGLWKVMGNQEAVDIAKRVKDPQRAAKQLATEALNRDSKDDISCIVVRFKG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151159g00019 182 PANTHER PROTEIN PHOSPHATASE 2 180 IPR015655 GO:0004722|GO:0006470
Stsc151159g00019 182 FunFam Probable protein phosphatase 2C 39 1 181 - -
Stsc151159g00019 182 SMART PP2C_4 2 178 IPR001932 -
Stsc151159g00019 182 SUPERFAMILY PP2C-like 3 181 IPR036457 -
Stsc151159g00019 182 Pfam Protein phosphatase 2C 3 173 IPR001932 -
Stsc151159g00019 182 ProSiteProfiles PPM-type phosphatase domain profile. 1 180 IPR001932 -
Stsc151159g00019 182 Gene3D - 1 182 IPR036457 -
Stsc151159g00019 182 CDD PP2Cc 3 180 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151159g00019 Stsc-Chr151159 84235 86435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151159g00019 2 181 PP2C-type Phosphatase Gene Family AT1G22280 74.444 5.95e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151159g00019 K17506 - gmx:100776795 335.109