Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151159g00015 ATGAGTCCAACCAGCACTTTGACATCATTATGTGAAGATGCTGATTCTGGTGATAATGGACTGTCAACAATTTCTGTAACGGATTACATTCCACATGTTCAAGGGGATAAATATAGAGTAGGTTGTACTACTTACATTGAGGACCCAAAATCACATGTCATGCCATTAAGGAACACTATCACGGAGCAATGTGTTGGATTGTATACTGATCCTTCTATTGCACCGTGTTCTTCCATTTCATCCAGTTCAATGGGAAGCACCCTTGAACATGAAAAAGCTTTTACTGGGAATCTATTAGGATCTAATTCTGGCCTCATTGAGGAGGCAGGGGGTTCTCAGTCTCCCCAATCAAATTGGCAGATTCCCTTTGATGAGAATACTGGACCAATTCCAAGATGGAGCCTAACCGAATCCTTTGGTTTGGAATTTGAATCTGATTATAGCACGCCTTTATTTGGGGGTGAAACTGATAATGCAATTCCAGAGATTTATCCCGATTTGTTCACTTCTAATGGAGAGCTAAAAGATCAATCTGTGCAACAGAAGTTCTCAAAGCAGCCTACAGATGCACAATCTCAGTATGCACCAGGATTTGATACTGACTATAAACTTCCTCGGGAAGAAAGTGTCAGCTATCCCTTGACTGCAAAGCATGCATTGCTGGATGGAGAGGAGAATCTGAAGAAGGTTGATAGCTTCTCAAGGTGGATTACTAAAGAACTTGCAGAGGTGGATGATCTGCATCTGCAGACTTCCCCTGGTATTTCATGGAGCACAGATGAATGCGGGCATGTGATAGATGATACATCATTGAACCCATCCTTATCCCAAGATCAACTGTTCAGCATAAATGATTTTTCACCTAAATGGACGTATGCAGATTCCGAAATTGAGGTGTTGATTATTGGAGCCTTTTTGAAGAGTCAACCGGAGGTGGAAGCCTGTCACTGGTCCTGTATGTTTGGTGAAGTGGAGGTTCCTGCCGAAATTTTAGCCAATGGAATTATGTCCTGTCAAGCTCCACCTCATCAGGTTGGGCGCGTACCTTTCTATGTAACCTGTTCCAATAGGTTTGCTTGTAGTGAAGTCAGGGAATTTGAGTACAGAGAGGGCTTTTCTAGGAATGTAGATGTTGCAGATTTTTTCTACAGTTCAACTGAAATGATGCTTCATTTGCGACTTGAGGAGTTAATTTCTTCGATATCAGTGCTATCTACTAATCAAGATTTTGAGGGTTATATGGAGACAAGAAACTTAATTTTTAAGCTTATTTCACTTAAAGAGGAAGAGGAATATTCACATAAGGAAGAGGCAACTGCAGGATTGAGTGTATCGCAACACAAATTGGAGGAGCATGTGTTTCACAGTAGGGTTAAAGAAAAGCTTTACTCATGGCTTCTTCACAAGGTAACTGAAGGTGGTAAAGGGCCAAATGTATTAGACAGGGATGGTCAGGGTGTGTTACATTTAGTTGCTGCTCTCGGTTATGATTGGGCTATAACTCCAATTATAAATGGTGGAGTTAACATCAACTTCCGTGATATGAATGGATGGACAGCTTTACATTGGGCTGCATCCTGCGGCAGAGAGCGAACAGTTGCTGTTCTTGTCTCCATGGGTGCAGCAGCTGGAGCATTGACAGATCCAAGTCCAGAATTTCCTTCTGGTAGAACAGCTGCTGATCTTGCTTCTAGCAATGGACATAAAGGAATCTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACCTTGCATCACTTACAATGGATGATCCAAGTGAAGATGGTAGGAATAAAACTTCAGGTGGGAAAGCAGTGCAGACACCTTCAGAGAGAAGTGCAACACCTCCACTTTATAGTGATGTACCAGATTCTCTCTGCCTTAAGGATTCTCTTGCTGCTGTCCGTAATGCTACACAAGCTGCTGATCGCATACATCAAGTATTTAGGATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTATGAAGNNNNNNNNNNAATGAGTTTGGATTGTCAGATCAGCAAGTTCTTTCCTTTATAG 2043 0.4175 MSPTSTLTSLCEDADSGDNGLSTISVTDYIPHVQGDKYRVGCTTYIEDPKSHVMPLRNTITEQCVGLYTDPSIAPCSSISSSSMGSTLEHEKAFTGNLLGSNSGLIEEAGGSQSPQSNWQIPFDENTGPIPRWSLTESFGLEFESDYSTPLFGGETDNAIPEIYPDLFTSNGELKDQSVQQKFSKQPTDAQSQYAPGFDTDYKLPREESVSYPLTAKHALLDGEENLKKVDSFSRWITKELAEVDDLHLQTSPGISWSTDECGHVIDDTSLNPSLSQDQLFSINDFSPKWTYADSEIEVLIIGAFLKSQPEVEACHWSCMFGEVEVPAEILANGIMSCQAPPHQVGRVPFYVTCSNRFACSEVREFEYREGFSRNVDVADFFYSSTEMMLHLRLEELISSISVLSTNQDFEGYMETRNLIFKLISLKEEEEYSHKEEATAGLSVSQHKLEEHVFHSRVKEKLYSWLLHKVTEGGKGPNVLDRDGQGVLHLVAALGYDWAITPIINGGVNINFRDMNGWTALHWAASCGRERTVAVLVSMGAAAGALTDPSPEFPSGRTAADLASSNGHKGISGFLGESLLTSHLASLTMDDPSEDGRNKTSGGKAVQTPSERSATPPLYSDVPDSLCLKDSLAAVRNATQAADRIHQVFRMQSFQRKQLAQYEXXXXMSLDCQISKFFPL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151159g00015 680 SUPERFAMILY Ankyrin repeat 467 575 IPR036770 -
Stsc151159g00015 680 FunFam Calmodulin-binding transcription activator 2 276 372 - -
Stsc151159g00015 680 Gene3D - 447 578 IPR036770 -
Stsc151159g00015 680 SUPERFAMILY E set domains 283 369 IPR014756 -
Stsc151159g00015 680 MobiDBLite consensus disorder prediction 104 124 - -
Stsc151159g00015 680 ProSiteProfiles Ankyrin repeat region circular profile. 516 541 - -
Stsc151159g00015 680 Pfam IPT/TIG domain 283 368 IPR002909 -
Stsc151159g00015 680 MobiDBLite consensus disorder prediction 586 619 - -
Stsc151159g00015 680 MobiDBLite consensus disorder prediction 600 615 - -
Stsc151159g00015 680 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 114 674 - -
Stsc151159g00015 680 MobiDBLite consensus disorder prediction 104 126 - -
Stsc151159g00015 680 ProSiteProfiles Ankyrin repeat profile. 516 548 IPR002110 GO:0005515
Stsc151159g00015 680 Pfam Ankyrin repeats (3 copies) 488 571 IPR002110 GO:0005515
Stsc151159g00015 680 Gene3D Immunoglobulins 276 371 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151159g00015 Stsc-Chr151159 69075 73967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151159g00015 4 661 CAMTA Transcription Factor Family AT5G64220 45.507 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151159g00015 K21596 - gmx:100795682 894.034