Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151159g00009 ATGGATTCTGCGATCTCCGTTACCACACCGGCTCAGATGGTACTCTTTAAGGCGCTCCACCGCCACTTCGCCACCACGGCTCCTCACCGCCTTCCGCTCCTCCGCCGGAGCTTCAAATGCGCAGTCAATTCCTACGCCGGCCGCCACATTCCGACCTCACCCGCCGCTTTCGGTTTCTCGCCGTCGCTCGGTTCCTTCCGCGTTCTGCTTCCGCCTCAGCCGCAGTGCCGTTTACGGTGCGTTTCAAGCTCCGCTGCTTCCTTCGCCTCTGAAACCGGCGGCGGAGGCGGAACTGGAACTGGCGGCGAAGGAGGAGGAGGAGGAGGAGGCGGAGGCGAGTCTGGAGACGGTAGCGTGAAGTTAGTTGGAGACGCAGCTCAGGAGGTTTCGGCACTTTCGCCTGATGTGATCATTCTCGATGTTTCGGGAATGACGTGTGGTGGATGTGCTGCGACTGTAAAGAGGATTCTGGAAAGTCGTCCCCAAGTGTCATCTGCTAGTGTGAATCTTACTACAGAGACAGCTATTGTTTGGCCTGTATCTGAAGCGAAAAAAGCACCAAATTGGCAGAAGCAGTTAGGGGAGGCACTTGCAGAGCATTTGACTAACTGTGGATATAGCTCCAGCCTTCGAGTGGCAGGTAAGGAAGATAGCAACTGA 660 0.5652 MDSAISVTTPAQMVLFKALHRHFATTAPHRLPLLRRSFKCAVNSYAGRHIPTSPAAFGFSPSLGSFRVLLPPQPQCRLRCVSSSAASFASETGGGGGTGTGGEGGGGGGGGGESGDGSVKLVGDAAQEVSALSPDVIILDVSGMTCGGCAATVKRILESRPQVSSASVNLTTETAIVWPVSEAKKAPNWQKQLGEALAEHLTNCGYSSSLRVAGKEDSN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151159g00009 219 MobiDBLite consensus disorder prediction 90 119 - -
Stsc151159g00009 219 ProSitePatterns Heavy-metal-associated domain. 141 170 IPR017969 GO:0046872
Stsc151159g00009 219 ProSiteProfiles Heavy-metal-associated domain profile. 135 209 IPR006121 GO:0046872
Stsc151159g00009 219 CDD HMA 139 209 IPR006121 GO:0046872
Stsc151159g00009 219 Gene3D - 136 214 - -
Stsc151159g00009 219 FunFam Copper-transporting ATPase PAA1, chloroplastic 135 210 - -
Stsc151159g00009 219 Pfam Heavy-metal-associated domain 139 206 IPR006121 GO:0046872
Stsc151159g00009 219 SUPERFAMILY HMA, heavy metal-associated domain 137 183 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151159g00009 Stsc-Chr151159 48171 51145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151159g00009 13 213 Primary Pumps ATPases AT4G33520 52.913 4.48e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151159g00009 K17686 - ahf:112717811 320.857