Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151158g00010 ATGAACCTTCTTCCTATGATTCTCTCCATGTTCCTCATTCTTCTTCACCGTGCAGATGCACAATCACAGCAACACCACCCTCCTTTTCATTCTCCTGCACCTTCACCTTCACCTGCACTTTCACATGTTCCTGTTTCTCAACCCATTGCTCCACATTCCCCCTCCAATTCCATGATCCCTGCTTTCTCCCCTGGATTTCAGGAACAACTGCACCGGAAAGGTTCACACAACAAAGTGGTTATCTCGGTGGCAGTGGCTGCAGCTGCAGTTGGTGCAGTCATTCTCACCCTGCTATGCTTCTGGATTTGCCATTACAAGCGTAGCTCAAAATCAAGCAAGAAGAATCAGAATCTTCACATCTCAGTGGAGAAAGGGGTGATGGGAATGAAGACGGTTGGTATGAAGGGTTGTGCTCCAATCATTGATTATAAGCAAATAGAGAAAAGCACGAATCAGTTTGATGAAAGTAACATCTTGGGTGAAGGAGGTTTTGGATGTGTTTACAAGGCTCGTTTCGATGATAATCTTGTTGTTGCTGTTAAGAAGCTACACTGTCAAACTCAAAATGCTCAGAGAGAATTCGAGAATGAGGTTGAATTGTTGAGCAAAATTCAGCATCCAAATATAATTCCTCTGCTGGGCTGTAGCATTGATGGGGACACCAGGTTCATTGTTTATCAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGACCTACTAGAGGGTCTGCATTGACTTGGAACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAATATCTACATGAGCACTGTCACCCTCCTGTCATTCATAGAGATATGAAATCCTCCAATATTCTTTTGGATGCAAACTTCAATGCCAAGCTATCTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATCAAGCTTTCAGGCACATTGGGGTATGTAGCCCCGGAGTACCTTCTAGACGGGAAATTAACAGATAAAAGTGATGTGTATGCATTTGGGGTTGTACTTCTTGAACTTCTACTGGGAAGGAAGCCTGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCAATGCCAGCATTGACAGACAGAACCAAACTCATGAACATTGTGGATCCAGTGATCAAAGATACAATGGATGTGAAGCACTTATATCAGGTTGCTGCTGTTGCTGTGCTGTGTGTTCAGCCAGAGCCAAGTTACCGTCCCTTAATCACTGATGTTCTTCATTCACTTGTGCCTCTTGTTCCCATTCATCTTGGAGGAACACTTAGATCATCATCATCAGCAGTTTCTGTTTCTGATTGA 1341 0.4385 MNLLPMILSMFLILLHRADAQSQQHHPPFHSPAPSPSPALSHVPVSQPIAPHSPSNSMIPAFSPGFQEQLHRKGSHNKVVISVAVAAAAVGAVILTLLCFWICHYKRSSKSSKKNQNLHISVEKGVMGMKTVGMKGCAPIIDYKQIEKSTNQFDESNILGEGGFGCVYKARFDDNLVVAVKKLHCQTQNAQREFENEVELLSKIQHPNIIPLLGCSIDGDTRFIVYQLMQNGSLEAQLHGPTRGSALTWNMRMKIALDTARGLEYLHEHCHPPVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPALTDRTKLMNIVDPVIKDTMDVKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIHLGGTLRSSSSAVSVSD 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151158g00010 446 Gene3D Phosphorylase Kinase; domain 1 111 227 - -
Stsc151158g00010 446 FunFam Protein kinase superfamily protein 121 228 - -
Stsc151158g00010 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Stsc151158g00010 446 ProSiteProfiles Protein kinase domain profile. 153 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151158g00010 446 Gene3D Transferase(Phosphotransferase) domain 1 229 428 - -
Stsc151158g00010 446 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Stsc151158g00010 446 CDD STKc_IRAK 159 426 - -
Stsc151158g00010 446 SUPERFAMILY Protein kinase-like (PK-like) 138 423 IPR011009 -
Stsc151158g00010 446 PANTHER OS01G0750732 PROTEIN 28 430 - -
Stsc151158g00010 446 SMART serkin_6 153 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151158g00010 446 FunFam probable receptor-like protein kinase At1g80640 229 428 - -
Stsc151158g00010 446 MobiDBLite consensus disorder prediction 23 47 - -
Stsc151158g00010 446 Pfam Protein kinase domain 154 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151158g00010 Stsc-Chr151158 85371 88963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151158g00010 140 427 Receptor kinase-like Gene Family AT3G58690 48.980 2.26e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Stsc151158g00010 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151158g00010 - - ahf:112784689 704.901