Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151156g00012 ATGGAGGTGTTCAAAGCAGTTGCCAAGAATGAACTTGCAACTCATGGAAGTGTTGCTATCAGAGCTGACCAGAATAGTTATAGTTACAAGCAACTAATCTTGTCTGCACAGAAGATATCTAATATATTGTGTGGCAGCGACGTAAAGCCAGGAAACCTTGGTGGAGCTAGGATAGGAATTGTAGCTAAACCCTCTGCTGAATTTGTAGCTGGAGTACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAACCAGAGCTCTTACATGTGATTAATAATTCGGATGTGTCTACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAGCCTTGCCAATAAAACTTCTTCTCAGTTTTTTCATCTCCCACCTGTTCTCACTAAGTCCTCAGGGAAAAGCAGGGATGATGATTCACAAAATGGGGAAATTGATGTTGATAGAATTTTCCGGGACAATATTGAAAAACCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACAACAGGCAAACCTAAGGGAGTGGTTCATACTCACAGAAGCATTGCTGCTCAGGTCCAAACCTTGGCAAATGCATGGGAGTATACATCTGCCGATAAGTTTCTACACTGTCTACCGTTGCATCATATCCTTGAAAGATCCTCGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCATCTGAAGGATCTAAGGCTGATGATGCTATAACTGTTTTCACTGGAGTTCCAACTATGTACACTCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCCACCTCAGCATCTGCTGCACGGAACTTGCGTCTTATGATGTGTGGATCCTCTGCACTCCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCTTTGAAAGGCGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGCATAGAGGTCAAGATCCTTGTAGATGAGGACAGTGGAAAAGACAAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCCTTTAAAGAATATTGGAAACTTCCAGAGATAACAAAAGAATCATTTACTGAAGATGGATTCTTTAAGACTGGGGATGCAGTTACTACAGATGAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTCTCTGCCTTAGAAATTGAATCAGTTATACTCGAGCATCAAGCTGTCTCGGAATGCTGCGTTTTGGGCTTACCCGACAAAGATTACGGGGAAGTTGTCGGTGCGATTATTGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAATCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATACCAACTAAACTTTTCGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAAATTCTGGCTTCAGAACAGTAG 1599 0.4296 MEVFKAVAKNELATHGSVAIRADQNSYSYKQLILSAQKISNILCGSDVKPGNLGGARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEPELLHVINNSDVSTILSTEDHSELMQSLANKTSSQFFHLPPVLTKSSGKSRDDDSQNGEIDVDRIFRDNIEKPSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLANAWEYTSADKFLHCLPLHHILERSSVEFMPKFSVRGIWQRWRESYPSEGSKADDAITVFTGVPTMYTRLIQGYHAMDPELQATSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIEVKILVDEDSGKDKTKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVSECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSTWAKDKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKILASEQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151156g00012 532 PANTHER ACYL-COA SYNTHETASE 27 528 - -
Stsc151156g00012 532 CDD MCS 17 526 - -
Stsc151156g00012 532 Gene3D - 2 416 IPR042099 -
Stsc151156g00012 532 MobiDBLite consensus disorder prediction 138 153 - -
Stsc151156g00012 532 MobiDBLite consensus disorder prediction 132 153 - -
Stsc151156g00012 532 SUPERFAMILY Acetyl-CoA synthetase-like 13 530 - -
Stsc151156g00012 532 PRINTS AMP-binding signature 178 186 IPR020459 -
Stsc151156g00012 532 PRINTS AMP-binding signature 166 177 IPR020459 -
Stsc151156g00012 532 Gene3D - 419 532 IPR045851 -
Stsc151156g00012 532 Pfam AMP-binding enzyme 14 422 IPR000873 -
Stsc151156g00012 532 Pfam AMP-binding enzyme C-terminal domain 433 518 IPR025110 -
Stsc151156g00012 532 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151156g00012 Stsc-Chr151156 62881 68576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151156g00012 166 530 Monolignol Biosynthesis Gene Families AT4G19010 28.278 3.91e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151156g00012 K18660 - gmx:100813324 894.804