Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151154g00002 ATGCAAAGCTTCAAGACAGCTCAAACAAGCTCCCAACTCTATTGTCATTCTCCCTTCTTGCTTCGGGGAGACAGTAACACCAACCGGAACTCCACGCGTTTCTCTGATCTTGGTGAGCTTCAACATTCTGCAACTGTGTTTCATCATGAAGACGCTGTTGATTTAAGCTCAGGCTCAATGTTTAATATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGGACTAACTTGCAGTATGGGACATTGAACACGAACCTTGGGAGTGCAGAGGTTGGTGGGTCAGGGATGGGTATGGGGAATAACTTGCCATTAGGAAATGGTAATGTTGAGAATTGGGGTGATTCAGGGATGGTGGGTGAAAACAGCCAACAGACTGATGATACTTCAACAGATATTGAGGCTGATGATAGAAATCAATGCAATAGAGTACAGAATGGGGCACCCAAGGTTGTGGAGTCAAAGGATGAGACAAAGATCAAAGCTGATGACCCGAAGACTATGCGGAGGCTTGCCCAAAATCGTGAGGCTGCAAGGAAAAGTCGCTTAAGAAAAAAGGCATATGTACAGCAGCTGGAGAACAGCCGAGCGAAGCTCTTACAATTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAAGGGGGATCATAGTAATTCTTCTCTTGGAAATGGGGCCTTAGCATTTGATATGGAGTATGCTCGGTGGGTTGATGAGCATCAACATTTGCTAAATGAACTTAGATCAGCCTTAAATTCACAAATGGGTGATAATGAACTACATCTTCTTGTTGACGGTGTCATGGCACATTATGATGAATTATTTCGGTTAAAGAGCATAGGAGCAAAGGCTGATGTCTTCCACATGCTCTCTGGGATGTGGAAGACACCTGCAGAGAGGTGGCTCATGTGGCTTGGCGGATTCCGGTCGTCCGAACTTCTCAAGATAGTTAAGAACCACCTTGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAAGCGTTGCAACAATCTCTTTCAGACACACTTTCCTCGGCCACCCTAGGACCTGCCGGTGCCGGAAATGTTGCTGATTATATGGGCCAGATGGCAATTGCAATGGGTAAGATTGCCAATCTAGAGAGTTTCCTTCACCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACGACACGACAAATTGCACGAGCCCTCCTTGTGATGAATGATTACATTTCAAGATTAAGAGCACTCAACTCATTATGGTTAGCTCGCCCTAGAGAGTAG 1350 0.4533 MQSFKTAQTSSQLYCHSPFLLRGDSNTNRNSTRFSDLGELQHSATVFHHEDAVDLSSGSMFNMKSNNVAVSVAGTNLQYGTLNTNLGSAEVGGSGMGMGNNLPLGNGNVENWGDSGMVGENSQQTDDTSTDIEADDRNQCNRVQNGAPKVVESKDETKIKADDPKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATKGDHSNSSLGNGALAFDMEYARWVDEHQHLLNELRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLSGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSATLGPAGAGNVADYMGQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWLARPRE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151154g00002 449 SUPERFAMILY Leucine zipper domain 165 208 IPR046347 GO:0003700|GO:0006355
Stsc151154g00002 449 Pfam bZIP transcription factor 165 203 IPR004827 GO:0003700|GO:0006355
Stsc151154g00002 449 CDD bZIP_HBP1b-like 165 217 - -
Stsc151154g00002 449 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Stsc151154g00002 449 Gene3D - 164 213 - -
Stsc151154g00002 449 Coils Coil 184 211 - -
Stsc151154g00002 449 PANTHER TRANSCRIPTION FACTOR TGA9 112 449 - -
Stsc151154g00002 449 SMART brlzneu 161 224 IPR004827 GO:0003700|GO:0006355
Stsc151154g00002 449 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 207 IPR004827 GO:0003700|GO:0006355
Stsc151154g00002 449 ProSiteProfiles DOG1 domain profile. 230 446 IPR025422 GO:0006351|GO:0043565
Stsc151154g00002 449 Pfam Seed dormancy control 248 322 IPR025422 GO:0006351|GO:0043565
Stsc151154g00002 449 FunFam BZIP family transcription factor 164 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151154g00002 Stsc-Chr151154 28134 35372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151154g00002 3 449 bZIP Transcription Factor Family AT1G68640 53.750 4.71e-160 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151154g00002 DOG1 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151154g00002 K14431 - gmx:100797393 640.958