Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151150g00004 ATGGTGTCAGAGCTGGCACAAGTGGTAACAGGAGGGCAAGCCAACACACAAGAAAAATGGTGGAGCCGTCAACATGAACAAGGAGGAAGAAGCGCTTTTACTATGAATATCACTTCATCATCTTCAGGAGCTTCTATGATGCATCAGCAGCATGATGATGATGATGATGCTTCTGCCTCTGCTCTTTGGGTTGGCCACAAAAGAGGGCGTCAACAACACACTGATATTCATTCTGCTGCATCTTCTCATCAATTGTTACAGCATGTCACTGCCCTCTATGCTTCACAACCACACTATTCATCAGTGACAGAAGAATCAACAGATATCGCCGCCACCGGAAGCGGCAGCGCAGCAACACCATCAACCGAAAGTGGTGCATCATATGAAGAAGCAGGGGAGAGGAAGAGGAGATACAGAGGAGTGAGGCAAAGACCATGGGGAAAATGGGCTGCGGAGATTCGAGACCCTCACAAAGCAGCAAGAGTCTGGCTTGGAACCTTCGACACGGCGGAAGCCGCCGCAAGAGCCTACGACGAAGCCGCATTGAGGTTCAGAGGAAACAAAGCCAAACTCAACTTCCCTGAAAATGTCAGATCAATCCCAATGCCAACACAATCAACCACCGTTCAGGCATCACCGGAACCAATTTTCCGGCCGGTCATGCAGGCGGCGCCGTCGCATCCTTCTCAGGGCTCCTCTGAGCAGATGATGAGGGACTACTGGCAATACTGTCAGTTGTTGAAGAGTTCCGGTGATTACTTTCATGGATTTGATCAGTGGCTTTACCATTCGCAAATGAATTTGCCAATTCAATCTTCATCACCGTTATCAACTTCATCTCCTTCGTCTTCGTCTTCGATTTCAATGTCTTCTTCATCGCCAATTGAGTTTTCAGCCTCTACTGGTCAATCGTCCTCTGCTTCGTTTCCTCTGTTTTCTTCTTCAGCTCAGCAGCAACTAGAGGTTTTCCGGCCGCCGGGATCATATTCCGAGGGAGGCAGCGGCGGATTGGGTTTTCCACCACCTTCAACGTGGCCGGATACCGGTGGCTATCGTCCTCCTCGGAGTTGA 1071 0.4977 MVSELAQVVTGGQANTQEKWWSRQHEQGGRSAFTMNITSSSSGASMMHQQHDDDDDASASALWVGHKRGRQQHTDIHSAASSHQLLQHVTALYASQPHYSSVTEESTDIAATGSGSAATPSTESGASYEEAGERKRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRSIPMPTQSTTVQASPEPIFRPVMQAAPSHPSQGSSEQMMRDYWQYCQLLKSSGDYFHGFDQWLYHSQMNLPIQSSSPLSTSSPSSSSSISMSSSSPIEFSASTGQSSSASFPLFSSSAQQQLEVFRPPGSYSEGGSGGLGFPPPSTWPDTGGYRPPRS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151150g00004 356 MobiDBLite consensus disorder prediction 271 310 - -
Stsc151150g00004 356 Pfam AP2 domain 137 186 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 SUPERFAMILY DNA-binding domain 137 195 IPR016177 GO:0003677
Stsc151150g00004 356 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 MobiDBLite consensus disorder prediction 1 29 - -
Stsc151150g00004 356 MobiDBLite consensus disorder prediction 103 142 - -
Stsc151150g00004 356 FunFam Ethylene-responsive transcription factor 2 136 195 - -
Stsc151150g00004 356 ProSiteProfiles AP2/ERF domain profile. 137 194 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 SMART rav1_2 137 200 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 MobiDBLite consensus disorder prediction 322 356 - -
Stsc151150g00004 356 CDD AP2 137 196 IPR001471 GO:0003700|GO:0006355
Stsc151150g00004 356 Gene3D AP2/ERF domain 136 196 IPR036955 GO:0003700|GO:0006355
Stsc151150g00004 356 MobiDBLite consensus disorder prediction 103 126 - -
Stsc151150g00004 356 PANTHER DNA-BINDING DOMAIN 87 289 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151150g00004 Stsc-Chr151150 17855 20066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151150g00004 124 251 AP2-EREBP Transcription Factor Family AT5G50080 62.500 5.63e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc151150g00004 AP2 6.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151150g00004 - - adu:107467893 338.961