Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151148g00011 ATGACTGCACTAATAAAAAATCCAAGAGTGTTAAAGAAAGTTCAAGAGGAAGTTAGAAACTTTGGAGGTCAAAAAGATTTCTTAGAAGAAGAAGATATTAAAAAGTGTAGCTATTTAAAGGCTGTGCTAAAAGAAACATTAAGATTATATCCACCAGGACCATTACTTGTGCCAAAAGAAACAAATGAAAAGTGCAGTATAAATGGCTACGAAATTCCAAGCAAGACTATAGTGTATGTGAATGTCTGGGCTATTCATCGAGATCATGAGTCTTGGAAAGACCCATATGAATTTTATCCTGAGAGATTCTTAGACAGTGATGTAGATTTTCTTGGACAAGATTTCGAGCTGATTCCATTTGGTGCTGGTCGAAGAATTTGCCCAGGTATGCATATGGCACTTGCTTCTCTTGACCTTATTCTTGCTAATCTTCTTCACTCCTTTGATTGGGAACTCCCAGAAGGGATCAAGAAAGAAGATATTGATACTCAAGTGTTGCCTGGAATAACACTACTTAAGAAAAATCCTCTTTATCTTATTGCCAAAAAATTATAA 555 0.355 MTALIKNPRVLKKVQEEVRNFGGQKDFLEEEDIKKCSYLKAVLKETLRLYPPGPLLVPKETNEKCSINGYEIPSKTIVYVNVWAIHRDHESWKDPYEFYPERFLDSDVDFLGQDFELIPFGAGRRICPGMHMALASLDLILANLLHSFDWELPEGIKKEDIDTQVLPGITLLKKNPLYLIAKKL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151148g00011 184 PANTHER CYTOCHROME P450 71B11-RELATED 1 182 - -
Stsc151148g00011 184 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Stsc151148g00011 184 Coils Coil 11 31 - -
Stsc151148g00011 184 FunFam Predicted protein 1 179 - -
Stsc151148g00011 184 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 SUPERFAMILY Cytochrome P450 2 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 Pfam Cytochrome P450 2 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00011 184 Gene3D Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151148g00011 Stsc-Chr151148 103665 104699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151148g00011 1 183 Cytochrome P450 AT3G26330 55.191 2.26e-69 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151148g00011 - - gmx:100801312 288.115