Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151148g00009 ATGGTGTCACCACTTGTCCTAATTTTACGTCTAACTCTTCCGTTGATTCTGTTCTTCTTATTCCAAAAACAAAGGACTCTAAAGAACAAAGCTCTTCCACCAGGTCCAAGAGGCCTTCCAATAATTGGAAATCTTCACCAATTAGATAATTCTTCACTTTATCTTCAGCTATTTGAACTCTCAAAGAAATATGGCCCTATCTTCTCCCTTCAATTAGGTCTAAAGCCAGCAATTATTATTTCATCTCCTAAATTGGCCGAAGAAGCATTGAAAAACCATGACCGCGAATTTTCCGGAAGACCAAGCTTAATTGGTCCACAAAAATTGACCTACAATGGGTTATCCATGTCTTTTTCTCCATACAATCAATATTGGAGAGAAATTAGAAAAACATTTGTAGCCCATATTCTTAGCTCTAAGCGTGTATCAAGCTTTTCTTCAATAAGAACATTTGAGGTCAAGCAATGGATCAAGAAAATATCAAGTCATGCATCATCAAAAAAGGTAACAAATTTGAATGAAATGTTAACTTCTCTAACAAGCACTATTATTTGTAGGATTGCCTTTGGAAGAAGGTACGAAGATGAAGGAGTTGAAAGGAGTAGGTTCCATGATTTGCTCAATGAATTTCAAGCAATGCTGGCTAGCTTCTTTGTTTCGGATTATATTCCTTTCTTGGGTTGGATTGATAGACTCAATGGAATGCATGCACGTCTTGATAGAACTTTCAAGGAGTTGGATAAGTTCTATCAAGAAGTGATTGATGAGCACATGGATCCTAATAGAGACACTTCCAATGGAGAGGATATCATTGATGTCTTGCTTCAATTGAAGAAGAACCAATCATTATCCGTTGACTTCACTATTGATCACATCAAAGCACTCTTCATGGACATACTTTTAGCAGCAACAGATACAACTGCCGCTACATCAGTTTGGGCTATGACTGCACTAATAAAAAATTCAAGAGTAATGAAAAAGGTTCAGGAAGAAGTTAGATACTTTGGAGGCCAAAAAAATTTCATAGAAGAAGAAAATATTAAAAAGTGTAGCTATTTAAACGCTGTGATAAAAGAAACATTAAGATTATACCCAGCAGGACCATTACTTGTGCCAAAAGAAACAAATGAAAAGTGCAGTATAAATGGCTACGAAATTCCAAGCAAGACTATGGTGTATGTGAATGCTTGGGCTATTCATAGAGATCCTGAAGCTTGGAAGGATCCATATGAATTTTATCCTGAGAGATTCATAAGTAATAATCTAGATTTTCTTGGACAAAATTTCGAATTGATTCCATTTGGTGCTGGTAGAAGAATTTGCCCAGGTATACATATGGCACTTGCTTCCCTTGACCTTATTCTTGCTAATCTTCTTTACTCCTTTGATTGGGAGCTTCCAGAAGGGATGACAAAAGAAGACATTGATACTCAGGTGTTGCCTGGATTAACACAACATAAGAAGAACCCTCTTTACCTTATTGCCAAAAATTATAACAATGGTAATTAG 1509 0.3625 MVSPLVLILRLTLPLILFFLFQKQRTLKNKALPPGPRGLPIIGNLHQLDNSSLYLQLFELSKKYGPIFSLQLGLKPAIIISSPKLAEEALKNHDREFSGRPSLIGPQKLTYNGLSMSFSPYNQYWREIRKTFVAHILSSKRVSSFSSIRTFEVKQWIKKISSHASSKKVTNLNEMLTSLTSTIICRIAFGRRYEDEGVERSRFHDLLNEFQAMLASFFVSDYIPFLGWIDRLNGMHARLDRTFKELDKFYQEVIDEHMDPNRDTSNGEDIIDVLLQLKKNQSLSVDFTIDHIKALFMDILLAATDTTAATSVWAMTALIKNSRVMKKVQEEVRYFGGQKNFIEEENIKKCSYLNAVIKETLRLYPAGPLLVPKETNEKCSINGYEIPSKTMVYVNAWAIHRDPEAWKDPYEFYPERFISNNLDFLGQNFELIPFGAGRRICPGIHMALASLDLILANLLYSFDWELPEGMTKEDIDTQVLPGLTQHKKNPLYLIAKNYNNGN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151148g00009 502 Pfam Cytochrome P450 33 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 CDD CYP71-like 63 491 - -
Stsc151148g00009 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151148g00009 502 FunFam Cytochrome P450 83B1 19 494 - -
Stsc151148g00009 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Stsc151148g00009 502 PANTHER CYTOCHROME P450 71B11-RELATED 17 496 - -
Stsc151148g00009 502 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151148g00009 Stsc-Chr151148 97732 101157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151148g00009 19 493 Cytochrome P450 AT4G31500 47.490 1.45e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151148g00009 - - gmx:100801312 719.924