Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151148g00005 ATGAGATTCAAGCTTGGGAAGCGTGTGTTTCGGGTCACCCGATGGGTCTTTAGACGGATCAGGATCCGACCCAGGTACCAACGGTTAGGAGAGTCATCAAGAAAACCCATGTCAAAGCTTCTCAATTGGGGGCGCAAGTTGACTAGTGGGGCAAAGGCATTGTGTTACTCAGCTAAACACGGGTCGGGTTATAGTCGGGTTGGTGCCGACCCAACTCCTCCGGTGCCTAAGGGCTACTTGGCTGTGTATGTAGGCCAAAAGGAGGGTGGTGAGTTCCGGCGCGTGCTTGTGCCGGTGGTGTACTTCAACCATCCCTTATTCGGAGAGTTGCTCCGGGAGGCCGAGGCAGAGTTCGGATACCACCACCCGGGCGGGATCACGATACCTTGTCGGGTCACCGAGTTTGAACAAGTCAAGACCCGAATTGCATCCGGGTCAGGTAGCAAGAGGCTGATGTGGCTGCGGCATCATCAATGA 477 0.5514 MRFKLGKRVFRVTRWVFRRIRIRPRYQRLGESSRKPMSKLLNWGRKLTSGAKALCYSAKHGSGYSRVGADPTPPVPKGYLAVYVGQKEGGEFRRVLVPVVYFNHPLFGELLREAEAEFGYHHPGGITIPCRVTEFEQVKTRIASGSGSKRLMWLRHHQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151148g00005 158 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 137 IPR003676 GO:0009733
Stsc151148g00005 158 Pfam Auxin responsive protein 66 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151148g00005 Stsc-Chr151148 33086 33562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151148g00005 55 135 Calmodulin-binding Proteins AT3G43120 45.679 5.23e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151148g00005 K14488 - csav:115707646 184.882