Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151146g00011 | ATGGAAAAGAATAATAATGTGTATGATGAAGAAAATAATGGGCATTCATCAAAACACAAGAGGCTCAAATTATTTGGGTTTGAACTGAACCCAAAGGATCATCATCATCATTCAGAAGTAGTAATAGAAGATGAAAGTGTGAATTCTTCAAATTCATCAGTTTCATCAACATCATCATCAGGTGAGAAAAGTAGTAATAATAATACTATTATTATTCCACATGAAGAGAAGAATAATAACAAGAAATTTGAGTGCGAATATTGTTACAAGGAATTTGCAAACTCACAAGCATTAGGGGGACACCAAAATGCACACAAGAAAGAGAGAATGAAGAAGAAGAAGTTGCAGCTTCAAGCAACCAAGGCTACCACCATCAACCACTGCTTCTTACAACCATCAACAGGCTTCAATAATAGTTTTGATGAGTTCTTCATGACTACTACCCTTTGTGATGAATCTCAGATCAGCTTTAATAATAATAATAATGATCAAGATGATGTCTCAAAGTGGTATGTTCCTTCTTATGATGATCAACAAGAAAGTTGCATGTTCAATTTCTCCCATGTTGGTTCAGATCATCATCACCATCATCACCAGGGGAATGTGAAAGGTTTGGATCTTGAACTAGGCCTCAGCTTGGAGTCAAATACAACAAGATCCTTTCTATGGAGAACTACATAG | 681 | 0.3539 | MEKNNNVYDEENNGHSSKHKRLKLFGFELNPKDHHHHSEVVIEDESVNSSNSSVSSTSSSGEKSSNNNTIIIPHEEKNNNKKFECEYCYKEFANSQALGGHQNAHKKERMKKKKLQLQATKATTINHCFLQPSTGFNNSFDEFFMTTTLCDESQISFNNNNNDQDDVSKWYVPSYDDQQESCMFNFSHVGSDHHHHHHQGNVKGLDLELGLSLESNTTRSFLWRTT | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151146g00011 | 226 | Gene3D | Classic Zinc Finger | 57 | 132 | - | - | |
Stsc151146g00011 | 226 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 85 | 105 | IPR013087 | - | |
Stsc151146g00011 | 226 | MobiDBLite | consensus disorder prediction | 44 | 74 | - | - | |
Stsc151146g00011 | 226 | MobiDBLite | consensus disorder prediction | 40 | 75 | - | - | |
Stsc151146g00011 | 226 | SUPERFAMILY | beta-beta-alpha zinc fingers | 79 | 110 | IPR036236 | - | |
Stsc151146g00011 | 226 | PANTHER | ZINC FINGER PROTEIN 5 | 12 | 214 | IPR044299 | GO:0010090 | |
Stsc151146g00011 | 226 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 83 | 110 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151146g00011 | Stsc-Chr151146 | 68414 | 69208 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151146g00011 | 21 | 126 | C2H2 Transcription Factor Family | AT1G68360 | 41.818 | 1.20e-17 | 77.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151146g00011 | - | - | ahf:112791844 | 213.386 |