Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151146g00011 ATGGAAAAGAATAATAATGTGTATGATGAAGAAAATAATGGGCATTCATCAAAACACAAGAGGCTCAAATTATTTGGGTTTGAACTGAACCCAAAGGATCATCATCATCATTCAGAAGTAGTAATAGAAGATGAAAGTGTGAATTCTTCAAATTCATCAGTTTCATCAACATCATCATCAGGTGAGAAAAGTAGTAATAATAATACTATTATTATTCCACATGAAGAGAAGAATAATAACAAGAAATTTGAGTGCGAATATTGTTACAAGGAATTTGCAAACTCACAAGCATTAGGGGGACACCAAAATGCACACAAGAAAGAGAGAATGAAGAAGAAGAAGTTGCAGCTTCAAGCAACCAAGGCTACCACCATCAACCACTGCTTCTTACAACCATCAACAGGCTTCAATAATAGTTTTGATGAGTTCTTCATGACTACTACCCTTTGTGATGAATCTCAGATCAGCTTTAATAATAATAATAATGATCAAGATGATGTCTCAAAGTGGTATGTTCCTTCTTATGATGATCAACAAGAAAGTTGCATGTTCAATTTCTCCCATGTTGGTTCAGATCATCATCACCATCATCACCAGGGGAATGTGAAAGGTTTGGATCTTGAACTAGGCCTCAGCTTGGAGTCAAATACAACAAGATCCTTTCTATGGAGAACTACATAG 681 0.3539 MEKNNNVYDEENNGHSSKHKRLKLFGFELNPKDHHHHSEVVIEDESVNSSNSSVSSTSSSGEKSSNNNTIIIPHEEKNNNKKFECEYCYKEFANSQALGGHQNAHKKERMKKKKLQLQATKATTINHCFLQPSTGFNNSFDEFFMTTTLCDESQISFNNNNNDQDDVSKWYVPSYDDQQESCMFNFSHVGSDHHHHHHQGNVKGLDLELGLSLESNTTRSFLWRTT 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc151146g00011 226 Gene3D Classic Zinc Finger 57 132 - -
Stsc151146g00011 226 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Stsc151146g00011 226 MobiDBLite consensus disorder prediction 44 74 - -
Stsc151146g00011 226 MobiDBLite consensus disorder prediction 40 75 - -
Stsc151146g00011 226 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Stsc151146g00011 226 PANTHER ZINC FINGER PROTEIN 5 12 214 IPR044299 GO:0010090
Stsc151146g00011 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc151146g00011 Stsc-Chr151146 68414 69208 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151146g00011 21 126 C2H2 Transcription Factor Family AT1G68360 41.818 1.20e-17 77.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151146g00011 - - ahf:112791844 213.386