Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151146g00007 ATGGAGTGTGAGGGCGTGGTTTCAGGGGTGAGAATGGGAGAGTCATCCGAAGAGGTTCATGTCTTAGCCGTTGATGACAGCCTCGTCGATCGCAAGGTCATCGAACGCTTGCTCAAAATCCTAGCTTGTAAAGTGACTGCTGTGGATAGTGGAGTGAGAGCACTGGAGTATCTAGGACTCGATCAATCTGACGCTTTTGTTGAGGGTTTGAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGGGATGACCGGTTATGACCTCCTCAAGAAAATCAAGGAATCTTCCACGTTCAGAGAAATTCCAGTTGTGATTATGTCCTCTGAAAATATCTTGCCGCGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCCGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACGGCGTTGGTGGTAGGATCAACAAGAGGAAGCTACCGGATACTACTGAGCTTGATCTCTCTTCATCACCACCGTCCGATTCATCATCTTCACCCTCCATTTCTCCATCTTCGCCGCCCGTCATTGACTCCCCAATCCAACGGCTCAAAATGACCACCACCGCCCTTGATTGA 600 0.4883 MECEGVVSGVRMGESSEEVHVLAVDDSLVDRKVIERLLKILACKVTAVDSGVRALEYLGLDQSDAFVEGLKVDLIITDYCMPGMTGYDLLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYGVGGRINKRKLPDTTELDLSSSPPSDSSSSPSISPSSPPVIDSPIQRLKMTTTALD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151146g00007 199 CDD REC_typeA_ARR 21 140 - -
Stsc151146g00007 199 Pfam Response regulator receiver domain 21 137 IPR001789 GO:0000160
Stsc151146g00007 199 ProSiteProfiles Response regulatory domain profile. 20 145 IPR001789 GO:0000160
Stsc151146g00007 199 MobiDBLite consensus disorder prediction 159 199 - -
Stsc151146g00007 199 SUPERFAMILY CheY-like 19 140 IPR011006 -
Stsc151146g00007 199 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 148 IPR045279 GO:0009736
Stsc151146g00007 199 Gene3D - 19 165 - -
Stsc151146g00007 199 SMART REC_2 19 141 IPR001789 GO:0000160
Stsc151146g00007 199 MobiDBLite consensus disorder prediction 154 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151146g00007 Stsc-Chr151146 52268 53591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151146g00007 9 180 Response Regulator Gene Family AT1G59940 63.978 9.45e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151146g00007 Response_reg 1.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151146g00007 K14492 - vvi:100263979 236.498