LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151146g00006	ATGGCTTTGATTTTGAATAGGATTCTTCTACTCAGCCTTGTTGTGTTGTTTTCTATTTGTTTTTTATTACCAAAATGCCATTCTCAAACAACTTCACCTCAGAACATTGAAACTTTCTATCCTAATGAAACTTCAGCGCAGCCACCGGAGGCCGCGCAAAGGCCTGAGCCCCCGAGAGAGGCTCAGCCTTCGCAGCAGCCACCGGTGGCTGCGCCTAGAAGTAGTAGCAGCTCATCATCAAATGGTAAGGTGGCTAAAGCTGTAGCTGCAACTGCTGCAAGCACCATAGTTGTTTGTGGTTTACTCTTCTTTTTAGTCCAAAGATGTTTAAAGGCAAGAAAAAGAGAGGAGGAGGCAACATTAACATCCAATAACAATGCTCCGGTTGCGGCCGCGGCCGGGGACAAGCGTGTGGCTCCTCAAGGGAACACGTTTGAGAGAATTGAAGGGAATGTGAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAAAGATCCAATAAGGATCTTCTTCATAAGCAGATTCTGAGAAACAAACAAGAAGAAGAAGATAATCATGTCAAGAAATCTAAATCCATTCAAGAAACCCCTCTTCTTAGAGGAAAATCTTCAGCTTCACACATGAACATAGTTCCAGAAATTGATGAGCCATATCAGATGACAAGAATTGCCTCTCCAAATCAATCAAACACTCCTCCTCCTCCTGCTTCTCCTTCGTCGCCGCCACCCTCAAAAGGGAATAGCCCTGTCCCTCCACCTCCCCCTCCCCCTCCTCCAATTCCAGCAAGAAAATCATCATCAAAGAAAACACCACCTGCTTCTACTGAAATGGTAGTTACCTCCACCAGCAAGAGGATGAACTCTTCAGGAAAAGCTGCAGTGGAATCAGGCAATGACAATGTGAAGCTGAAGCCTTTGCATTGGGATAAGTTGAATACTAATAATGCTGATCACTCCATGGTCTGGGACAATGTTGATCGAGGTTCATTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGCTATGTTGCCAAGAACAGAAGATCTCCTAAGGGAAAGAATCCGAGCAACGATACAGCCGCAGGCTCCACTAGAATTTTCCTTCTAGACTCAAGAAAATCACAGAACATTGCTATTGTTGTGAAATCTTTGGCAATCTCGCGAGACGAAATCATTGATGCTGTCACTGATGGTAGAGGGCTTAATGCAGATACCCTTGAGAAGCTTGTTAGAATTGCTCCAACAGAAGAGGAACAATCTCTTATCATAGAATACAAAGGAGACCCTGCAATTCTTGCTTCAGCTGAATCATTCTTGTTTCACATCCTTAAATCCGTTCCTTCAGCGTTTAAGCGCTTGATTGCCATGCTATTCAGGTTGAACTACACTTCTGAGATTCTAGAAATCAAGGAGTCTCTGCAGGTTCTTGAACTGGGGTGTAAAGAGCTTAAGAGCCAGAGAATCTTTGTGAAGCTTCTAGAAGCAGTGCTTAAGGCTGGAAATCGAATGAATGCCGGGACAGCCAGAGGTAATGCTCAAGCTTTCAATTTGGCTTCTCTGAGGAAGCTCTCTGATGTCAAAAGCACAGATGGGAAAACCACATTGCTTCATTTTGTGGTGGAAGAAGTAGTCCAGTCCGAAGGCAAGCGAATTTCTAAAAATAGTGGCGAAATCAATGAGAAGAATGCAGCTTCAGAAGAACAAAGAGAAAGGGAATATATAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTTTCTAATGTCAAGAAAGCAGCAATTATAGACTACAACACATTAGTTGGTTCAATCTCGGCCCTCTCCTCGCGGATCATTGAAATTCAAGAGCTTGTTTCCCAATGTAGGGATGGCGAAGGAGGGTATTTCGCGAAAGAGATGGATAATTTTGTTCAGAACTCTAAGGAGGAGTTGAAATTTGTGAGGGAGGAGCAAGCAAGAGTAATGCAGGTTATCAAGAGAACAAGAGATTATTATCAAGGAGGAGCTTCAAGAGAGAGTGCAGAACAAAGTCTGCAACTGTTTGTGATAGTAAAGGATTTCATGGGGATGGTTGATCAAGCTTGTGTGGAGATTGCAAGACATATGCAGAAAAGGAAGACACACAAGGCAGCTTCTTATGGCTAG	2181	0.4342	MALILNRILLLSLVVLFSICFLLPKCHSQTTSPQNIETFYPNETSAQPPEAAQRPEPPREAQPSQQPPVAAPRSSSSSSSNGKVAKAVAATAASTIVVCGLLFFLVQRCLKARKREEEATLTSNNNAPVAAAAGDKRVAPQGNTFERIEGNVKGLIVDEDGLDVIYWRKLEGKRSNKDLLHKQILRNKQEEEDNHVKKSKSIQETPLLRGKSSASHMNIVPEIDEPYQMTRIASPNQSNTPPPPASPSSPPPSKGNSPVPPPPPPPPPIPARKSSSKKTPPASTEMVVTSTSKRMNSSGKAAVESGNDNVKLKPLHWDKLNTNNADHSMVWDNVDRGSFRVDQDLMEALFGYVAKNRRSPKGKNPSNDTAAGSTRIFLLDSRKSQNIAIVVKSLAISRDEIIDAVTDGRGLNADTLEKLVRIAPTEEEQSLIIEYKGDPAILASAESFLFHILKSVPSAFKRLIAMLFRLNYTSEILEIKESLQVLELGCKELKSQRIFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVQSEGKRISKNSGEINEKNAASEEQREREYITLGLPIVGGISSEFSNVKKAAIIDYNTLVGSISALSSRIIEIQELVSQCRDGEGGYFAKEMDNFVQNSKEELKFVREEQARVMQVIKRTRDYYQGGASRESAEQSLQLFVIVKDFMGMVDQACVEIARHMQKRKTHKAASYG	726

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151146g00006	726	Pfam	Formin Homology 2 Domain	308	703	IPR015425	-
	Stsc151146g00006	726	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	302	726	IPR015425	-
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	276	304	-	-
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	232	307	-	-
	Stsc151146g00006	726	SMART	it6_source	302	718	IPR015425	-
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	51	65	-	-
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	188	204	-	-
	Stsc151146g00006	726	PANTHER	FORMIN-RELATED	17	714	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	67	81	-	-
	Stsc151146g00006	726	MobiDBLite	consensus disorder prediction	188	219	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151146g00006	Stsc-Chr151146	43386	46015	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151146g00006	11	718	FH2 protein (formin) Gene Family	AT1G70140	47.978	0.0	587

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151146g00006	-		-	adu:107481275	1061.98

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