Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151146g00006 ATGGCTTTGATTTTGAATAGGATTCTTCTACTCAGCCTTGTTGTGTTGTTTTCTATTTGTTTTTTATTACCAAAATGCCATTCTCAAACAACTTCACCTCAGAACATTGAAACTTTCTATCCTAATGAAACTTCAGCGCAGCCACCGGAGGCCGCGCAAAGGCCTGAGCCCCCGAGAGAGGCTCAGCCTTCGCAGCAGCCACCGGTGGCTGCGCCTAGAAGTAGTAGCAGCTCATCATCAAATGGTAAGGTGGCTAAAGCTGTAGCTGCAACTGCTGCAAGCACCATAGTTGTTTGTGGTTTACTCTTCTTTTTAGTCCAAAGATGTTTAAAGGCAAGAAAAAGAGAGGAGGAGGCAACATTAACATCCAATAACAATGCTCCGGTTGCGGCCGCGGCCGGGGACAAGCGTGTGGCTCCTCAAGGGAACACGTTTGAGAGAATTGAAGGGAATGTGAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAAAGATCCAATAAGGATCTTCTTCATAAGCAGATTCTGAGAAACAAACAAGAAGAAGAAGATAATCATGTCAAGAAATCTAAATCCATTCAAGAAACCCCTCTTCTTAGAGGAAAATCTTCAGCTTCACACATGAACATAGTTCCAGAAATTGATGAGCCATATCAGATGACAAGAATTGCCTCTCCAAATCAATCAAACACTCCTCCTCCTCCTGCTTCTCCTTCGTCGCCGCCACCCTCAAAAGGGAATAGCCCTGTCCCTCCACCTCCCCCTCCCCCTCCTCCAATTCCAGCAAGAAAATCATCATCAAAGAAAACACCACCTGCTTCTACTGAAATGGTAGTTACCTCCACCAGCAAGAGGATGAACTCTTCAGGAAAAGCTGCAGTGGAATCAGGCAATGACAATGTGAAGCTGAAGCCTTTGCATTGGGATAAGTTGAATACTAATAATGCTGATCACTCCATGGTCTGGGACAATGTTGATCGAGGTTCATTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGCTATGTTGCCAAGAACAGAAGATCTCCTAAGGGAAAGAATCCGAGCAACGATACAGCCGCAGGCTCCACTAGAATTTTCCTTCTAGACTCAAGAAAATCACAGAACATTGCTATTGTTGTGAAATCTTTGGCAATCTCGCGAGACGAAATCATTGATGCTGTCACTGATGGTAGAGGGCTTAATGCAGATACCCTTGAGAAGCTTGTTAGAATTGCTCCAACAGAAGAGGAACAATCTCTTATCATAGAATACAAAGGAGACCCTGCAATTCTTGCTTCAGCTGAATCATTCTTGTTTCACATCCTTAAATCCGTTCCTTCAGCGTTTAAGCGCTTGATTGCCATGCTATTCAGGTTGAACTACACTTCTGAGATTCTAGAAATCAAGGAGTCTCTGCAGGTTCTTGAACTGGGGTGTAAAGAGCTTAAGAGCCAGAGAATCTTTGTGAAGCTTCTAGAAGCAGTGCTTAAGGCTGGAAATCGAATGAATGCCGGGACAGCCAGAGGTAATGCTCAAGCTTTCAATTTGGCTTCTCTGAGGAAGCTCTCTGATGTCAAAAGCACAGATGGGAAAACCACATTGCTTCATTTTGTGGTGGAAGAAGTAGTCCAGTCCGAAGGCAAGCGAATTTCTAAAAATAGTGGCGAAATCAATGAGAAGAATGCAGCTTCAGAAGAACAAAGAGAAAGGGAATATATAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTTTCTAATGTCAAGAAAGCAGCAATTATAGACTACAACACATTAGTTGGTTCAATCTCGGCCCTCTCCTCGCGGATCATTGAAATTCAAGAGCTTGTTTCCCAATGTAGGGATGGCGAAGGAGGGTATTTCGCGAAAGAGATGGATAATTTTGTTCAGAACTCTAAGGAGGAGTTGAAATTTGTGAGGGAGGAGCAAGCAAGAGTAATGCAGGTTATCAAGAGAACAAGAGATTATTATCAAGGAGGAGCTTCAAGAGAGAGTGCAGAACAAAGTCTGCAACTGTTTGTGATAGTAAAGGATTTCATGGGGATGGTTGATCAAGCTTGTGTGGAGATTGCAAGACATATGCAGAAAAGGAAGACACACAAGGCAGCTTCTTATGGCTAG 2181 0.4342 MALILNRILLLSLVVLFSICFLLPKCHSQTTSPQNIETFYPNETSAQPPEAAQRPEPPREAQPSQQPPVAAPRSSSSSSSNGKVAKAVAATAASTIVVCGLLFFLVQRCLKARKREEEATLTSNNNAPVAAAAGDKRVAPQGNTFERIEGNVKGLIVDEDGLDVIYWRKLEGKRSNKDLLHKQILRNKQEEEDNHVKKSKSIQETPLLRGKSSASHMNIVPEIDEPYQMTRIASPNQSNTPPPPASPSSPPPSKGNSPVPPPPPPPPPIPARKSSSKKTPPASTEMVVTSTSKRMNSSGKAAVESGNDNVKLKPLHWDKLNTNNADHSMVWDNVDRGSFRVDQDLMEALFGYVAKNRRSPKGKNPSNDTAAGSTRIFLLDSRKSQNIAIVVKSLAISRDEIIDAVTDGRGLNADTLEKLVRIAPTEEEQSLIIEYKGDPAILASAESFLFHILKSVPSAFKRLIAMLFRLNYTSEILEIKESLQVLELGCKELKSQRIFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVQSEGKRISKNSGEINEKNAASEEQREREYITLGLPIVGGISSEFSNVKKAAIIDYNTLVGSISALSSRIIEIQELVSQCRDGEGGYFAKEMDNFVQNSKEELKFVREEQARVMQVIKRTRDYYQGGASRESAEQSLQLFVIVKDFMGMVDQACVEIARHMQKRKTHKAASYG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151146g00006 726 Pfam Formin Homology 2 Domain 308 703 IPR015425 -
Stsc151146g00006 726 ProSiteProfiles Formin homology-2 (FH2) domain profile. 302 726 IPR015425 -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 276 304 - -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 232 307 - -
Stsc151146g00006 726 SMART it6_source 302 718 IPR015425 -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 51 65 - -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 188 204 - -
Stsc151146g00006 726 PANTHER FORMIN-RELATED 17 714 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 67 81 - -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 188 219 - -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 34 81 - -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 34 49 - -
Stsc151146g00006 726 Gene3D Formin, FH2 domain 310 724 IPR042201 -
Stsc151146g00006 726 MobiDBLite consensus disorder prediction 237 274 - -
Stsc151146g00006 726 SUPERFAMILY Formin homology 2 domain (FH2 domain) 260 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151146g00006 Stsc-Chr151146 43386 46015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151146g00006 11 718 FH2 protein (formin) Gene Family AT1G70140 47.978 0.0 587