Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151145g00010 ATGGATAGGGTCTTCTCAGTCGACGAAATCCCCGACCACTTCTGGTCCTCTATCACCCCAGACCACCCACCTCCCTCCAACTCCAACCCCAACATCAACCGCAGCCCTTCCGAGTGGGCCTTCCAGCGCTTCCTCCAAGAAGCTGCACCTCCCTCTCCTCCCCACCAAAACGACGCCGTTTTCTTCATCCACGACGATGATCATACCCTTCCTCATCCCCCTAAGCCCGATCCAAACGACACCGTTTCTGTTCCCAAGAACGACGCCGTTTTGACCAATGCCCCTCCTCCCCCCCCTCCTACCACGACGACGAACAAAACATCTGCTTCATCTTCCCTCGGCGTTGATTCCGATGACTACCAGGCTCTCCTTAAGTGCAAGCTCAATCTTGCATGTGCCGCTGTCGCCATGACTAGGGCAGCATCTTTGTCCAAGTCTCAAGATCCAGCAACTTTTGCTGATAGTGGATCATCTAATACATCTCAAGTTGGACCTCAGCCTTCTTTAAAAGGATCTGGTACTTCTGGAAATGACCCACCTAAAATACAAGACAAAGATGCCAAAGCACCAATTGGGATACCTTCCATACCTGCCATACAAAAGAAACCTGCTGTTACAGCCAGGCCATCAACAAGTGGATCGTCAAGGGAACAGTCGGATGATGAGGAAGCTGAGGGAGAGACAGATCTGAATGACAACATGGACCCTGCTGACGTAAAACGAGTAAGAAGGATGCTTTCTAATAGGGAGTCAGCCAGACGTTCAAGAAGAAGAAAGCAAGCTCATTTAAATGAGTTGGAGACACAGGTTTCTCAATTAAGAGGTGAAAATTCTTCCTTGCTAAAGCGCCTCACTGATGTAAGCCACAAGTACAATGAATCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCAGAAGAAACCGTCAAAAGAATTACAGGGTTGAACCCAGTAATGCATGCCATGTCTGATTTAACATCAATGGGCATGCCTACATTTGACAGTAGCCCTCCTGACACATCGGCCGATGCAGCTGTCCCCGTGAGAGACGATACTCACCATCACCACCACTTCTTTCAACAAACATCAAGTAATCATCACATGCCGAATCATGATCTCAGGGTAAACAATGGGTTGGGAGACATATCTGCAATCGAGAATGTGCCACAGAATGCCGCGGCTGTGGTGGTTGGGAATAAGATGGGTCAAACAGCGTCCTTACAGCGGGTGGCAAGCTTGGAACACCTTCAGAAGAGGATCAGGGGTGGTGTGGATTCATGTGGCGGACCTTCTAATAATCATGAGCACTAA 1341 0.4862 MDRVFSVDEIPDHFWSSITPDHPPPSNSNPNINRSPSEWAFQRFLQEAAPPSPPHQNDAVFFIHDDDHTLPHPPKPDPNDTVSVPKNDAVLTNAPPPPPPTTTTNKTSASSSLGVDSDDYQALLKCKLNLACAAVAMTRAASLSKSQDPATFADSGSSNTSQVGPQPSLKGSGTSGNDPPKIQDKDAKAPIGIPSIPAIQKKPAVTARPSTSGSSREQSDDEEAEGETDLNDNMDPADVKRVRRMLSNRESARRSRRRKQAHLNELETQVSQLRGENSSLLKRLTDVSHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPVMHAMSDLTSMGMPTFDSSPPDTSADAAVPVRDDTHHHHHFFQQTSSNHHMPNHDLRVNNGLGDISAIENVPQNAAAVVVGNKMGQTASLQRVASLEHLQKRIRGGVDSCGGPSNNHEH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151145g00010 446 Coils Coil 249 283 - -
Stsc151145g00010 446 Coils Coil 298 318 - -
Stsc151145g00010 446 PANTHER BASIC LEUCINE ZIPPER 63 1 435 - -
Stsc151145g00010 446 SMART brlzneu 236 300 IPR004827 GO:0003700|GO:0006355
Stsc151145g00010 446 Pfam bZIP transcription factor 239 291 IPR004827 GO:0003700|GO:0006355
Stsc151145g00010 446 SUPERFAMILY Leucine zipper domain 240 290 IPR046347 GO:0003700|GO:0006355
Stsc151145g00010 446 MobiDBLite consensus disorder prediction 143 239 - -
Stsc151145g00010 446 CDD bZIP_plant_GBF1 241 292 IPR045314 GO:0003700|GO:0006355
Stsc151145g00010 446 Gene3D - 239 295 - -
Stsc151145g00010 446 Pfam Basic leucine-zipper C terminal 307 434 IPR020983 -
Stsc151145g00010 446 MobiDBLite consensus disorder prediction 1 114 - -
Stsc151145g00010 446 FunFam BZIP transcription factor 238 289 - -
Stsc151145g00010 446 MobiDBLite consensus disorder prediction 143 179 - -
Stsc151145g00010 446 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Stsc151145g00010 446 MobiDBLite consensus disorder prediction 60 74 - -
Stsc151145g00010 446 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 293 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151145g00010 Stsc-Chr151145 71876 76552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151145g00010 1 333 bZIP Transcription Factor Family AT4G02640 41.399 3.88e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151145g00010 bZIP_C 6.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151145g00010 K25784 - gmx:100170702 497.664