Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151143g00002 ATGGAGTTGCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGAGCACTGGCAAGGAAATGCAGAACCCGTTGAGGATAAGCAAGCTCTGCTTGATTTCGTGAACAGATTCCCTCCTTCAAGACCTCTGAATTGGGATGAGTCCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAATGAACATGAGTCCCGGGTCATCGCCATTCGCTTGCCGGGGGTTGGATTTCACGGCACCATTCCGCCGGATACTATTAGCCGCCTCTCCGCACTACAAACTTTGAGCCTCAGATCCAATGTCATAACTGGCCGGATACCTTCTGACTTTTCCAAGTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATCTGTCCAATAACCATTTCAATGGCACCATTCCTGATTCCCTTTCCAATTTGACCGGGCTTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGTGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCCTCATTCTTTGGAAATAATATTTCTCTTGGGAGCTCTCCTGTTGTTCCGCCAGTGCCTCCTCCGCTTTATGGCCCTTCTTCGAGATCTAAGAAGCACGGAAGGCTCAGCGAAACAGCGCTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTTTGGCATTTGTTTTCCTAATCTTTTTATGCTGCTCTAGAAGGAGGGGTGAAGATGATGATGCCTTCAATGGGAAGTTGCAGAAGGGTGACATGTCTCCAGAGAAAGCTGTCTCAAGGAACCAGGATGCGAATAATAAGCTGGCATTCTTTGAAGGATGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGGACATTTGGTACTGCATACAAGGCAGTACTGGAAGATGCAACCACAGTTGTAGTGAAGAGGTTAAAGGAGGTAGCAGCTGGTAAGAAGGATTTTGAACAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTACTATTCCAAAGATGAGAAACTAATGGTATATGATTACTATAGCCAGGGGAGCGTCTCTTCAATGTTACACGGAAAAAGAGGAGAGGAAAGAGTGGCTCTAGATTGGGATACTCGGCTGAAAATAGCCCTAGGTGCTGCAAGAGGCATTGCTCATATCCATCTTGCGAATGGAGGTAAGCTTGTACATGGCAACATCAAATCCTCAAATATCTTCCTCAATGCCAAACAGTATGGTTGTGTATCTGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCCTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACAGACACCAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTTGGAGTGGTGTTACTTGAGCTTCTGACAGGGAAATCCCCTATCCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCTATGTCATGTGTGGTAAGGATGCCGGATCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCAGCAGTCATCGGACAACCAAGCAGAACAGAAAATATCCCGTGACATCGATATTTCCCCTTCTTCCTCTCCCTCACCCTCCCCCTTACCAAAAGGAAGCGAATGA 1923 0.4571 MELLRILLSSICLLVVIEHWQGNAEPVEDKQALLDFVNRFPPSRPLNWDESSSMCANWTGVTCNEHESRVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGRIPSDFSKLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGTIPDSLSNLTGLAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSPVVPPVPPPLYGPSSRSKKHGRLSETALLGITIACGVLGLLAFVFLIFLCCSRRRGEDDDAFNGKLQKGDMSPEKAVSRNQDANNKLAFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAVLEDATTVVVKRLKEVAAGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVALDWDTRLKIALGAARGIAHIHLANGGKLVHGNIKSSNIFLNAKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETQQSSDNQAEQKISRDIDISPSSSPSPSPLPKGSE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151143g00002 640 PANTHER OS05G0588300 PROTEIN 5 610 - -
Stsc151143g00002 640 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Stsc151143g00002 640 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151143g00002 640 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Stsc151143g00002 640 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Stsc151143g00002 640 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Stsc151143g00002 640 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Stsc151143g00002 640 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Stsc151143g00002 640 FunFam pollen receptor-like kinase 1 297 402 - -
Stsc151143g00002 640 MobiDBLite consensus disorder prediction 603 628 - -
Stsc151143g00002 640 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Stsc151143g00002 640 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151143g00002 640 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Stsc151143g00002 640 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 403 610 - -
Stsc151143g00002 640 SUPERFAMILY L domain-like 39 209 - -
Stsc151143g00002 640 MobiDBLite consensus disorder prediction 603 640 - -
Stsc151143g00002 640 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Stsc151143g00002 640 SUPERFAMILY Protein kinase-like (PK-like) 332 596 IPR011009 -
Stsc151143g00002 640 Gene3D Ribonuclease Inhibitor 138 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151143g00002 Stsc-Chr151143 26214 30077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151143g00002 1 631 Receptor kinase-like Gene Family AT4G23740 65.055 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc151143g00002 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151143g00002 - - adu:107479781 1045.8