Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151139g00012 ATGAAGAAATCACCTTCTTCAGGCAGCACCAACAGAAGTTTTCTTCATGAAAATAGCCCAAAAAGAAAACAGAATAATGATCATTCTTTCTTGACATCTTTCAAGTCTGCTTTCAGAGCTGTTTTTGCATTGTTCCTCTCTGGAAGCAAAAGAAAAACACCATCAAAAGTTGATGAAAGAAACAACATATCAAAAGTCAGAGGAGTATCATCTTCAATTGACTCCTCCAAGAGTTCATCAAAATGGAAATTTTCTAGTTCCTATGCATCATCATCTAGAACTGCAAGTGGACAACTTGAAGTTGGAAACTTCACCTTTGAAGAAATCTACAAGTCAACATCAAGATTCTCCCCGGAGAATCAGATAGGGGAAGGTGGATTCGGAACGGTTTACAAAGGCAAGCTTAGCGACGGAACTCTTGTGGCCGTGAAACGCGCCAAGAAGGACGGACCGAAACACTTGTACGAGTTCAAGAATGAGATATACACCTTGTCAAAGATAGAGCATCTGAATCTTGTGAGGTTATATGGATATTTGGAGCATGGTGAAGAGAAGATTATTGTTGTTGAGTATGTTGGAAATGGGACCCTTCGGGATCATCTAGATGGTATTCAAGGTGATGGACTAGAAATTGGTGAGCGTCTAGATGTAGCAATTGATGTAGCTCACGCAATCACTTATCTTCACATGTACACAGATAATCCAATTATTCATAGAGACATCAAAGCATCAAACATTCTAATAACAGAGAACTTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCACGCTTGTCTGAGGACCCTTCAGCAACTCATATTTCAACTCAAGTTAAAGGAACTGCTGGCTACATGGACCCTGAGTACCTCAGAACATACCAACTCACTGATAAGAGTGATGTTTATTCCTTCGGCGTTTTGCTTGTCGAAATGATGACCGGACGACATCCCATCGAGCCCAAGAGACCGCTCGAAGAGAGAGTCACAATCAGATGGGCAATGAAGATGCTAAAACAAGGGGATGTTGTGTTAGCAATGGACCCCAGAATGCGAAGAAGCCCAGCCTCTAACAAGGCAGTGAAGAAGGTTCTAAAACTAGCCTTCCAATGCCTTGCGCCTTCGCGACAGTTGCGGCCATCAGTGAAGAGTTGTGCAGAGGTTCTATGGGGAATCAGAAAAGACTTCAGAGATGAAGTCACTTCTAATGTTCCTCCTCTTCCTTCTCACCAATCTGAAAATTTTCCTCAAAGAGGAAAGAATATGCATATGGTGTTTGGTATTGAAGATGATGAGAGCAATAAATTTGCTTCTGCACCCAACCAAATTCATTCATAA 1332 0.4167 MKKSPSSGSTNRSFLHENSPKRKQNNDHSFLTSFKSAFRAVFALFLSGSKRKTPSKVDERNNISKVRGVSSSIDSSKSSSKWKFSSSYASSSRTASGQLEVGNFTFEEIYKSTSRFSPENQIGEGGFGTVYKGKLSDGTLVAVKRAKKDGPKHLYEFKNEIYTLSKIEHLNLVRLYGYLEHGEEKIIVVEYVGNGTLRDHLDGIQGDGLEIGERLDVAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLRAKVADFGFARLSEDPSATHISTQVKGTAGYMDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPIEPKRPLEERVTIRWAMKMLKQGDVVLAMDPRMRRSPASNKAVKKVLKLAFQCLAPSRQLRPSVKSCAEVLWGIRKDFRDEVTSNVPPLPSHQSENFPQRGKNMHMVFGIEDDESNKFASAPNQIHS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151139g00012 443 MobiDBLite consensus disorder prediction 1 15 - -
Stsc151139g00012 443 Pfam Protein tyrosine and serine/threonine kinase 119 386 IPR001245 GO:0004672|GO:0006468
Stsc151139g00012 443 ProSitePatterns Protein kinases ATP-binding region signature. 122 148 IPR017441 GO:0005524
Stsc151139g00012 443 Gene3D Phosphorylase Kinase; domain 1 75 191 - -
Stsc151139g00012 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 192 401 - -
Stsc151139g00012 443 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151139g00012 443 MobiDBLite consensus disorder prediction 1 26 - -
Stsc151139g00012 443 SMART serkin_6 116 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151139g00012 443 SUPERFAMILY Protein kinase-like (PK-like) 93 390 IPR011009 -
Stsc151139g00012 443 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 43 397 IPR044652 GO:0004672
Stsc151139g00012 443 Gene3D Transferase(Phosphotransferase) domain 1 192 403 - -
Stsc151139g00012 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 79 191 - -
Stsc151139g00012 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151139g00012 Stsc-Chr151139 88874 92225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151139g00012 87 380 Receptor kinase-like Gene Family AT1G79620 42.333 2.21e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Stsc151139g00012 PK_Tyr_Ser-Thr 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151139g00012 - - lja:Lj2g3v2222900.1 620.928