Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151138g00009 ATGGCGGAAAAAGTGTCAAAGGCAGCATTCGATGCGAAGATGTGGAAGCTCTTGAAGGAGTACAGCCAGGTGGTGGTGGTTACCTCCGATAACGTTGGTTCCAACCAAATCAATCGCATTCGGAGGAGTGTAAAGGGCGACTCCATTGTTGTTATGGGGAAGAACTCCATGATGAAGCGCTCCTTCACTCTCCAAGCTGGAAACAATGCCTTCCTCAACCTTATCCCTCTTCTTAGGGGAAATATAGCTTTGATTTTCACCAAAGGAGATATGAAGGAGGTTAGCGACGAGGTTGCTAAATTGAAGCTGCCTTTGGGCCTCAAGTGTTGTAACCAGCAGTTGTCGCAGGATTCTGAGCCTTTTCTTGTATGCTCAAAATTCACGCCGCACCAGCATTGTTTAATGACAAGATCAAGACAGCTCTTGGCAATGAGTGTATGGTCTCCTCTTCTCCTTTTAGCAGGTAACTTGTGA 474 0.4641 MAEKVSKAAFDAKMWKLLKEYSQVVVVTSDNVGSNQINRIRRSVKGDSIVVMGKNSMMKRSFTLQAGNNAFLNLIPLLRGNIALIFTKGDMKEVSDEVAKLKLPLGLKCCNQQLSQDSEPFLVCSKFTPHQHCLMTRSRQLLAMSVWSPLLLLAGNL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151138g00009 157 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 103 - -
Stsc151138g00009 157 Pfam Ribosomal protein L10 6 100 IPR001790 -
Stsc151138g00009 157 SUPERFAMILY Ribosomal protein L10-like 7 99 IPR043141 -
Stsc151138g00009 157 Gene3D - 3 116 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151138g00009 Stsc-Chr151138 49414 51011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151138g00009 1 103 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 58.182 2.05e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151138g00009 K02941 - twl:120015003 136.346