Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151137g00008 ATGCCTCCACCAAATAGGAGGGTTACTTTACGCAGAGGGAGTAACGTGGAGGTAATTGGTAAGGAAGAAGGGTTTTTTGGTTCTTATTATGAAGCCACTATTTTTAAATGTCTTGGCATGGGTTGTTACGTTGTCCAATATATGAACCTCCTTGAGGATAGTGGGCGTAAGCCTCTCCTTGATGTTGTGAGACTTAAGGACATTCGCCCTATTCCACCTGATCATGATGCAGATCTTGATGGATTCGAGGTCAACCAATGTATTGATGTGTATGACAACGAAGGTTGGTGGGTTGGGGAGATTAAAAGCAAGAGAAGACGTGGTGAATATTTTGTGTACTTTTCTTCAACAAATGAGGAGATTGTTTACTCTGCTCCCCAAATTAGGACTCACATGGAATGGAGCAATGGCTCGTGGACATTTCAGAACAACAGAACTCAACAATGA 447 0.4228 MPPPNRRVTLRRGSNVEVIGKEEGFFGSYYEATIFKCLGMGCYVVQYMNLLEDSGRKPLLDVVRLKDIRPIPPDHDADLDGFEVNQCIDVYDNEGWWVGEIKSKRRRGEYFVYFSSTNEEIVYSAPQIRTHMEWSNGSWTFQNNRTQQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151137g00008 148 CDD Tudor_Agenet_AtDUF_rpt1_3 10 73 - -
Stsc151137g00008 148 SMART agenet_At_2 8 76 IPR014002 -
Stsc151137g00008 148 SMART agenet_At_2 80 136 IPR014002 -
Stsc151137g00008 148 Pfam Agenet domain 13 73 IPR008395 -
Stsc151137g00008 148 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151137g00008 Stsc-Chr151137 114288 114936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151137g00008 22 141 PHD Transcription Factor Family AT5G58610 26.490 1.42e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151137g00008 - - vra:106753183 149.058